Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0021 ATGACCACTTTCCACGTTGTCGAGAAAGATCTAACCTCCAGATACGCGCGGTACGATGAATTGTTGGGGAAAGGAGCCTTCAAGACTGTATACAAAGCGTTTGACGAAGTGGACGGAATCGAAGTTGCTTGGAACATGATCAGCGTTGAGGACGTTGTGCAGACGCCGCAGCAGCTGGAAAAATTGTACTCGGAGATTCACCTGCTCAAGTCCTTGAAACACGACAATGTCATCAAGTTGTATAATTCTTGGGTCGATGATACCACCGGCACCATCAACATGATCACCGAATTGTTCACCTCCGGAAGTTTGAGGCAGTACCGGAATAAGCATAAGAATGTGGATATGAAAGCCATCAAGAACTGGGCGCGTCAGATTCTCTGCGGCTTGTGCTTTCTGCACTGTCACAGTCCTCCTATTGTTCATAGGGACCTGAAATGTGATAACATTTTTGTCAATGGGAATAGTGGACTGGTTAAGATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCAACTGCCCGGAGTGTCATTGGTACACCGGAGTTTATGGCCCCAGAGCTTTATGAGGAGGAATACAATGAACTTGTTGACATATATTCCTTTGGCATGTGCATCTTAGAAATGGTCACCTGCGAGTACCCGTACAGTGAATGTAATAATCCTGCACAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCCAAAGTAAATGATCCTGAAGTGAAGCAATTCATCGAGAAGTGTCTAGTTCCAGCATCTATGAGATTGTCTGCATCTGAACTACTGAAAGACCCATTCCTTGCAACTGAAAACACAAAGGAGATTAATCATGATATACTGGAGCTGCCTAATCCTCACACCAAATTGGTGAATCCACCAACATGTGAGCCTCATCCCATGGAGATAGATTCTAAATCCAGGCGTACTTCACCTGGCTCCTCCATGGGAAGAATTGAAGAAACTTCTCAAGTTTCATTTTTTGATCTTGTGAGGATGACCGAGAATAACAAATTTATGCTAAGAGGGGAGAAAAATGCTGAAAGTACAATTTCACTCACACTGAGAATTGCAAATGCTTGTGGTGGAGCGAGGAATATCCATTTCCCATTCTATATCAATTCTGATACAGCAATTTCCATTGCTGAGGAGATGGTGGAACATCTGGAACTCACAAATGAGGATGTATCTGTCATTGCAGAGCTAATAAATGACATGATTGCTAAGCTTGTCCCCAACTTGAAACCCTTAAGTGAGAAACTCTCATCCGGAACAGATCAATTGTACAGGCCTTCTTCGGAAGTTCAGAATGGTGAACAATTCAACTGCCACTGGCCATTACAATCAAGTGATTATGATATGAAGCCTGTGTTTAAGGATCTAGTTCACTCATGGCCTGTTGACGGGGATGATCTGGAGAAACAAGAATCTGTTATGTCAGATATATCAGTGGAGTGTGGGATTACAGTTGCCTCAGATTCTAAAGTTGTAGAGCCTGACATTTTTATTTTTGATGAATTCTGGGAGGGGTTTGATGCATTCAATTCCACTTCAGATGTCAGGTTTTGTGGGCAAGAGGATGGACACAAGAATCAATCAGAGAACTCATCAGGCTCTTTAATCAATTCATGTTGCTGCCCATTCAAAAACTTTGACATATCAAGTATATGTTCTCTTACTCTAGCTGACAAAGATCCTTCAGAAGGGCTGCGGTTGGAAATTGAAGCAATAGATACATACTTTGAACAACGCTTTCGTGAGCTTGAGATGATGAGGGTGGCAGCCATAGAAAGTTTGAAGAGGAGACATGGCGAGAAACATACCTGTGATGTGATGCATTAG 1857 0.4276 MTTFHVVEKDLTSRYARYDELLGKGAFKTVYKAFDEVDGIEVAWNMISVEDVVQTPQQLEKLYSEIHLLKSLKHDNVIKLYNSWVDDTTGTINMITELFTSGSLRQYRNKHKNVDMKAIKNWARQILCGLCFLHCHSPPIVHRDLKCDNIFVNGNSGLVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTCEYPYSECNNPAQIYKKVTSGIKPAALAKVNDPEVKQFIEKCLVPASMRLSASELLKDPFLATENTKEINHDILELPNPHTKLVNPPTCEPHPMEIDSKSRRTSPGSSMGRIEETSQVSFFDLVRMTENNKFMLRGEKNAESTISLTLRIANACGGARNIHFPFYINSDTAISIAEEMVEHLELTNEDVSVIAELINDMIAKLVPNLKPLSEKLSSGTDQLYRPSSEVQNGEQFNCHWPLQSSDYDMKPVFKDLVHSWPVDGDDLEKQESVMSDISVECGITVASDSKVVEPDIFIFDEFWEGFDAFNSTSDVRFCGQEDGHKNQSENSSGSLINSCCCPFKNFDISSICSLTLADKDPSEGLRLEIEAIDTYFEQRFRELEMMRVAAIESLKRRHGEKHTCDVMH* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0021 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 612 - -
Gso13g0021 618 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Gso13g0021 618 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Gso13g0021 618 ProSiteProfiles Protein kinase domain profile. 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0021 618 MobiDBLite consensus disorder prediction 292 322 - -
Gso13g0021 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gso13g0021 618 PANTHER WNK KINASE 4 612 - -
Gso13g0021 618 Gene3D - 354 441 - -
Gso13g0021 618 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0021 618 CDD STKc_WNK 14 273 - -
Gso13g0021 618 SUPERFAMILY Protein kinase-like (PK-like) 18 319 IPR011009 -
Gso13g0021 618 SMART serkin_6 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0021 618 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 356 412 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0021 Gso-Chr13 672136 675630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0021 7 607 MAP Kinase Kinase Kinase AT5G41990 50.083 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso13g0021 Pkinase 4.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0021 K08867 - gmx:100783717 1253.43