Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0020 ATGGCCAATCTCAGTAGTCCTGGATTTAACCTCTTTTTGGTGTCTCTCTTGGTTACGTTGGTCCAAATCCAAACCAAGGTGCAATGCTACCAGTACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCCATTTCACCAAGTTCACACCTCTACGACAAATGGTCCAAATATCACAACCTCAGGATCGGTGATTCGCTTCTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGCAGAATCCTACAAGAGCTGCAACCTTAAAGATCCGATTTTGTACATGAACAATGGCAACTCCTTGTTCAACATTACATCAGAGGGGGACTTCTACTTCACAAGTGGAGAGGCTGGTCATTGCCAAAAGAATCAAAAGCTTCATATAACTGTGGGAGTTGGGGGAAACACGAACGCACTTGCTCCAACTTCATTGCCTGAAAACGCAACCTCTTACCCAACTGTGTTTGGTAACATTCCCATGGCTCCTTCTAGTTCTAGGAGTACTTCTTCCTCACCTCACCGAACTTCAAAATTTTCCCTCTTAATTATTGGATTCTTCCTGTGTGCCCTGCTATCTAGCCTAATGTGA 594 0.4394 MANLSSPGFNLFLVSLLVTLVQIQTKVQCYQYKVGDLDSWGIPISPSSHLYDKWSKYHNLRIGDSLLFLYPPSQDSVIQVTAESYKSCNLKDPILYMNNGNSLFNITSEGDFYFTSGEAGHCQKNQKLHITVGVGGNTNALAPTSLPENATSYPTVFGNIPMAPSSSRSTSSSPHRTSKFSLLIIGFFLCALLSSLM* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0020 197 CDD OsENODL1_like 30 132 IPR041846 -
Gso13g0020 197 PANTHER MAVICYANIN 9 191 - -
Gso13g0020 197 Gene3D - 30 142 IPR008972 -
Gso13g0020 197 PANTHER BLUE COPPER PROTEIN 9 191 IPR039391 GO:0009055
Gso13g0020 197 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Gso13g0020 197 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gso13g0020 197 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0020 Gso-Chr13 636205 637411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0020 11 162 Phytocyanin Superfamily AT1G64640 54.248 2.14e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0020 - - gmx:100783186 393.275