Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g2035 ATGTGTAGAGGATGCAAGTTTACAGCAGAGGAGGAAAGGTTGGTGGTAGAATTGCAGGCACAGTTTGGGAACAAATGGGCCAAAATTGCAACGTATTTGCAAGGGAGAACCGACAATGATGTGAAAAACTTCTGGAGCAGTAGGAGGAAAAGGTTGGAGAGGATGTTGCAGAAGCCACCTACGTCAAAGCCGCACAAAAACAACGGAAAAACTCATATTAATCAAGTGGAAGAAATGGTTCCTCCTTGCAGTTCCAATCAGGTGGAGGAAATTCTATCTTACTCTACTTCCTATATGGGAAACACTCAAGTGTTCGAGATGATCAACCTACCAGATTTGATAAAACCAAACTATCAACAATTGGAAAATGATTACCTGAGTGCAGTTGAGGTTGAGGCCACCCCACTTCACACAGTACCATCGTTTGAGTCTTCATTAGGGTACAACTTCCCTCTACTCCCTGAACCTGATCCACTGATGGACTGTCCACTGTTCCCAGAGTGCCAGGACCTTGTTCCTGAGCCCTTTGATCCAATTTTTGTTGACGGGTTCAAGGAGAAAAAATGTTCAGAATGTGTATGCAGCAGCCAGAAGCTTGGGACCAGGTTGCCAACTTTTGGATTGGAAGGAAATTCTCAAAGTGCAAGTTCAAATGGCTTTTTCAAGGACTTCCCGAGCGAGATTTTTGAATACTTTGAGCACATTCCAACCTCGTCAGATCAATGA 726 0.4394 MCRGCKFTAEEERLVVELQAQFGNKWAKIATYLQGRTDNDVKNFWSSRRKRLERMLQKPPTSKPHKNNGKTHINQVEEMVPPCSSNQVEEILSYSTSYMGNTQVFEMINLPDLIKPNYQQLENDYLSAVEVEATPLHTVPSFESSLGYNFPLLPEPDPLMDCPLFPECQDLVPEPFDPIFVDGFKEKKCSECVCSSQKLGTRLPTFGLEGNSQSASSNGFFKDFPSEIFEYFEHIPTSSDQ* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g2035 241 ProSiteProfiles Myb-like domain profile. 6 49 IPR001005 -
Gso12g2035 241 CDD SANT 6 45 IPR001005 -
Gso12g2035 241 PANTHER TRANSCRIPTION FACTOR DUO1 3 241 - -
Gso12g2035 241 Pfam Myb-like DNA-binding domain 6 46 IPR001005 -
Gso12g2035 241 PANTHER MYB TRANSCRIPTION FACTOR 3 241 - -
Gso12g2035 241 SMART sant 3 51 IPR001005 -
Gso12g2035 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Gso12g2035 241 Gene3D - 6 80 - -
Gso12g2035 241 SUPERFAMILY Homeodomain-like 6 53 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g2035 Gso-Chr12 44434677 44436282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g2035 4 237 MYB Transcription Factor Family AT3G60460 32.836 3.89e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso12g2035 Myb_DNA-binding 5.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g2035 K09422 - gmx:121173231 497.664