Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g2034 ATGGATGCCACTCACTCCATGTTCTGTAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTTGTGTCACACGTCTTCAACGTTGTGTTTAGGACAGTGGGCCAACCTGGACCAATTGCACAAATTCTGGCTGGGTTAGTGCTAGGTCCAATGTCACATATAGAGTATATAAAGGCTACATTCTTTCCTGCCAGTTCAATAAATTACTATGAAGTTGTGAGCTACTTCTGTCGCATACATTTCATGTTTTTATTTGGGTTGGAGATGAATATTCACTACACCATGCGCAATCTACGTATAGTCAGCTTAGTAGCCTGTGGTGGTGCAATAATGGGTGGTGTGTTTGGTCTATCTGTCTCATTTTACTTGCATCAACAGCTAAACACCATTGACAATGCCCCCTTGTATTATTTTTGTATGATCATTATGCTAGTGGTGTCATACACAAGCTCGCCTATGGTGATTCGTTTGGCAGCAGAGTTAAGGTTTGCAGCATCAGATGTGGGGCGAATCGCAGTTTCTTCTGCATTGATAACAGAAATGGGGTGCTTGTTGTTGTTCAATGTGATGGTTAACTGGAGAAAACCAAATCACATTTCTGCTGGTTTCGGTTGCCTTGTAATTACTGCCTTGGTGGTTATCATAAACAGGTACTTAGCCGTTTGGTTAAACACAAGAAATACAAACCAGAAGTACCTCAAGGCTCCTGAGTTGATGCTCATTCTGCTCCTGCTCCTAACTTGCTCAATGATAATAGAAATTTGGGGTTACAACAGTATTATTAGTTGTTTCATCATTGGTTTGTTGTTTCCTAAGGAAGGTAAAACAGCTAGAACATTGCTGCATAAACTTGGTTATTCTATTTACAACTTTGTACTTCCAGTATATTTTGGGTACTTAGGCTTACAGTGTGATCTGATAAATGTCTTCAAGAGCCTGGAGAGGGCAATCAATATGGCCATATTGATATTGTTGAGCATTGGAAGCAAGCTTGGTGGTACTCTTATAGTTTGCCGCTACCTTAAAATTCCTACTAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCTGATCTTCTATTCATAGGTGCAGCAGCAAAGCAAGTAATTGTGAAGGCGTACAATGTTTTGTTGGTATCAATAGTACTTAACACAATAATATCAGGAGTAATTGTGGCTTTTCTAGTAAGAGGGGAAGAAAAAATGTTTGCAAACAACCATACAGCAATTGAGCCACAGCAAATGGAGGACGAGCTTCGAATTCTGGCTTGTGTGTATGACCCTCGTCAGGTATCTGCCATACTTGCCACAGTACTAGCGATACATGGCTCTAGAGTATCACCATCTACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACCTGTTATACCATGAGAAAGAAAATGCTGACCTTAGCGACGACGAGGACTATGGAGGCAATGATGTGGTGGAAATTAACAATGCTTTGGATAACTTCACTGCAGAAACAAAGATTCTAGTCCAACAAAGAAGGGCAGTATCTCCTTTCCCATCTTTGTATGAAGATGTGTGCAATGAAGCAGAAGATCTCCAAGTGTCCATAATTCTACTCCCCTTCCACAAGCACCAACGCATTGATGGGAAATTAGAAAGTGGGAAAGAGGGTATAAGGATCACTAACCAGAAGGTGCTAAGACATGCCCCTTGTTCAGTTGGTATCATAGTAGAAAGAGGACTTGCAAGGGTACCAGGCTTCTCACAACTAGTAGCATCTGAAGCCATACAAAATGTTGCAACACTTTTCTTTGGTGGCCCTGACGACCGCGAGGCTATTGCGTGGAGCCTACGCATTTCAGGGAGTCCGCGTGTCAACTTGACAATCATTAGATTTCTGTTGAGTTCCTCATCACAGAATGAAATTATTGAGAGTGGAGAATCTGAGGACAAAGAGATCTTGATGTCATTGTCTGGGGAGGAGACGGTGAATGAGATTGACAACACCTTCATGGTTGATTTCTACAACAGGTACGTGACTTCTGGCCAAATAGGGTATGTGGAGAAGTTTGTGAAGGATGGTGCACAGACAGTGGAATCTCTGAAAGAGATAGGGGACATGTACTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGACAGAGTTCATTGACAATTGGGATGAGTGACTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGCTCAGTTTTGATCGTTCAACAACACAGAGATGCCAAGAAAGCCCTATTGCATGCTTAG 2340 0.4188 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHVFNVVFRTVGQPGPIAQILAGLVLGPMSHIEYIKATFFPASSINYYEVVSYFCRIHFMFLFGLEMNIHYTMRNLRIVSLVACGGAIMGGVFGLSVSFYLHQQLNTIDNAPLYYFCMIIMLVVSYTSSPMVIRLAAELRFAASDVGRIAVSSALITEMGCLLLFNVMVNWRKPNHISAGFGCLVITALVVIINRYLAVWLNTRNTNQKYLKAPELMLILLLLLTCSMIIEIWGYNSIISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSLERAINMAILILLSIGSKLGGTLIVCRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVIVKAYNVLLVSIVLNTIISGVIVAFLVRGEEKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSRVSPSTTYLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNALDNFTAETKILVQQRRAVSPFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGIIVERGLARVPGFSQLVASEAIQNVATLFFGGPDDREAIAWSLRISGSPRVNLTIIRFLLSSSSQNEIIESGESEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAQTVESLKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDAKKALLHA* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g2034 779 PANTHER CATION/H + ANTIPORTER 21 769 - -
Gso12g2034 779 PANTHER CATION/H(+) ANTIPORTER 1 21 769 - -
Gso12g2034 779 Gene3D - 19 417 IPR038770 -
Gso12g2034 779 Pfam Sodium/hydrogen exchanger family 27 409 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g2034 Gso-Chr12 44419968 44422783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g2034 7 772 Antiporter Super Family AT1G16380 39.821 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g2034 - - gmx:100804522 1497.64