Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g2026 ATGGCCTCTTCAACTTTTCTTCATTCCTATTCTCTGCTTCTTCTAATTATTCTCCCCTTTCTCCCATCTGTGTTTAGTGCTACTTCTTCAAACTGCAGTGCTAATAGTATACACTTAAATTCCACTCTGGTCACCAATCACACATGGAATTCACCCTCTGGCCTCTTTGCCTTTGGTTTTCAAAATGTTTTATCCAACAAGGAATTCATGTCCGTGCTTGCAGTTTGGTTTCCCAAAGACCCCCACCGAACCATAGTATGGTATGCAAAATACAAACAAACTTCAGATCTTGGTACGATGCACGCTGTTTCCAGTATGCAAAAAAGTCTTGCTTTTCCTTCAGATTCCACAGTGAAGCTAACAAACAAAGGAATTGTATTGTATGACCAAAATGGCCAAGAGATGTGGCACCGTCCAAAAAACAACAGCATTGCCTTAGTAAGATGTGCTTCTATGTTAGACAGTGGAAATTTTGTGCTTCTGGATGAAACTGGCAAACACGTTTGGGAGAGCTTTGAAGAGCCCACAGATACCTTTTTGCCTGGTCAGATTCTGGCTAAGCCTAAAAGCTTCAGAGCCCGTCATTCTAACACAAGTTTTTATGATGGGAGTTTCGAACTCGCTTGGCAGAGCGATTACAATTTCGTTCTTTACTATTCACCACAATCAAGCGTTACACGTGAAGCTTACTGGGCCACTCAAACTAACAGCTATGATGAATCTCTGCTCGTCTTCAATGAGTCTGGACACATGTACATAAAAAGAAGTAACACGGGTAAAGTGATCCGTGAAGTCTTATATGGTGGATCAGAAGAGTTCTTGTACATGGCTAGAATTGATCCTGATGGGCTTTTCAGACTATATCGACACCGCAAAGATGATGACACAATTGCTGATAGCTGCAGTTCGGGATGGTGGAGTGTGGTGGATCGATATCCGAAAGATATTTGCCTTTCCATCACGATGCAAACTGGGAATGCTATCTGCGGTTATAACAGCTACTGCATTACCATCAACGGGAATCCTAGTTGTGAGTGCCCGGATATTTTTTCTTCTTTCGATCATGACAATAATCTCAAAACTTGTAGACCAGATTTTCCACTGCCCAGCTGCAACAAAGACGGGTGGGAGCAGAATAAGGATCTTGTAGATTTCAAAGAGTATCAAAATTTGGACTGGCCTCTCTCTGATTATGACAAGCTGGTTGGAACTGCAATGGACAAAGATATGTGTAGACAAAAGTGCCTAGAAGATTGCTTTTGTGCTGTGGCCATATATGGTGAGGGACAATGTTGGAAGAAGAAGTATCCTTTGAGCAATGGAAGGAAGCACCCTAATGTTACTAGAATAGCTCTTGTCAAGATACCTAAAACAGGTTTAAACAAGGATGGGACTGGGAGTCTTGGGAATGGGAGAGAACAGTCTACAATTGTTCTTGTCATATCAATACTCCTTGGAAGCTCAGTGTTCCTCAATGTCATTCTATTAGTTGCTTTGTTTGCTGCCTTTTACATTTTCTACCACAAGAAGCTTTTGAATAGTCCAAACTTGTCAGCTGCCACAATAAGGTACTATACGTACAAGGAGCTTGAAGAAGCAACTACAGGGTTCAAACAAATGTTGGGTCGCGGTGCTTTTGGAACAGTCTATAAAGGGGTGTTGAAATCAGACACAAGCAGGTATGTTGCTGTGAAGAGGCTAGATAAGGTGGTGCAAGAAGGTGAGAAGGAGTTCAAAACAGAAGTTAGTGTGATTGGACAAACCCACCACAGAAACTTGGTTCGTTTACTTGGTTACTGTGATGAAGAGGAGCATCGTCTTCTGGTGTATGAGTACATGAACAATGGCTCCTTGGCTTGCTTTCTCTTTGGGATCTCAAGGCCTCATTGGAACCAAAGAGTGCAAATTGCTTTGGGGATTGCAAGAGGTCTCACATATTTGCATGAAGAATGCAGCACTCAGATCATTCATTGTGACATAAAACCTCAAAATATACTCTTAGACGAGTTGTTCACGCCTAGGATTGCTGATTTTGGGTTGGCTAAGTTGTTGCTGGCTGAACAATCTAAAGCTACTAAGACGGGTTTGAGAGGGACTGTTGGTTACTTTGCACCTGAGTGGTTTAGGAAAGCTTCAATCACAACCAAAGTAGATGTTTACAGCTTTGGAGTGGTGCTGTTAGAGATCATATGTTGCAAGTCAAGTGTTTCCTTTGCAATGGCTAGTGAAGAAGAGACACTTATAGATTGGGCGTATCGTTGTTATAGCCAAGGGAAGGTAGCTAAGTTGGTAGAAAATGATGAGGAGGCAAAGAAAGACATAAAGAGGGTGGAAAAGCATGTGATGGTAGCAATTTGGTGCATTCAAGAGGATCCTTCGCTGAGACCCTCCATGAAGAAAGTTACGCAAATGCTTGAGGGTGTGACAACAGTTTCTTTGCCACCTCGCCCTGCCATATTCAGTTCATCATCGTTTGAAACATCATTTACTTTGTAA 2496 0.4211 MASSTFLHSYSLLLLIILPFLPSVFSATSSNCSANSIHLNSTLVTNHTWNSPSGLFAFGFQNVLSNKEFMSVLAVWFPKDPHRTIVWYAKYKQTSDLGTMHAVSSMQKSLAFPSDSTVKLTNKGIVLYDQNGQEMWHRPKNNSIALVRCASMLDSGNFVLLDETGKHVWESFEEPTDTFLPGQILAKPKSFRARHSNTSFYDGSFELAWQSDYNFVLYYSPQSSVTREAYWATQTNSYDESLLVFNESGHMYIKRSNTGKVIREVLYGGSEEFLYMARIDPDGLFRLYRHRKDDDTIADSCSSGWWSVVDRYPKDICLSITMQTGNAICGYNSYCITINGNPSCECPDIFSSFDHDNNLKTCRPDFPLPSCNKDGWEQNKDLVDFKEYQNLDWPLSDYDKLVGTAMDKDMCRQKCLEDCFCAVAIYGEGQCWKKKYPLSNGRKHPNVTRIALVKIPKTGLNKDGTGSLGNGREQSTIVLVISILLGSSVFLNVILLVALFAAFYIFYHKKLLNSPNLSAATIRYYTYKELEEATTGFKQMLGRGAFGTVYKGVLKSDTSRYVAVKRLDKVVQEGEKEFKTEVSVIGQTHHRNLVRLLGYCDEEEHRLLVYEYMNNGSLACFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDELFTPRIADFGLAKLLLAEQSKATKTGLRGTVGYFAPEWFRKASITTKVDVYSFGVVLLEIICCKSSVSFAMASEEETLIDWAYRCYSQGKVAKLVENDEEAKKDIKRVEKHVMVAIWCIQEDPSLRPSMKKVTQMLEGVTTVSLPPRPAIFSSSSFETSFTL* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g2026 831 ProSiteProfiles Bulb-type lectin domain profile. 34 173 IPR001480 -
Gso12g2026 831 PIRSF SRK 5 830 IPR024171 GO:0004674
Gso12g2026 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 235 IPR036426 -
Gso12g2026 831 SUPERFAMILY Protein kinase-like (PK-like) 518 806 IPR011009 -
Gso12g2026 831 Gene3D - 29 172 IPR036426 -
Gso12g2026 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 195 289 IPR036426 -
Gso12g2026 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Gso12g2026 831 SMART blect_4 40 175 IPR001480 -
Gso12g2026 831 CDD STKc_IRAK 541 807 - -
Gso12g2026 831 CDD PAN_AP_plant 377 456 - -
Gso12g2026 831 Gene3D Phosphorylase Kinase; domain 1 505 612 - -
Gso12g2026 831 Gene3D Transferase(Phosphotransferase) domain 1 613 812 - -
Gso12g2026 831 Pfam Protein kinase domain 538 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g2026 831 PANTHER - 2 827 - -
Gso12g2026 831 SMART serkin_6 535 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g2026 831 Coils Coil 760 780 - -
Gso12g2026 831 ProSiteProfiles Protein kinase domain profile. 535 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g2026 831 Pfam D-mannose binding lectin 113 191 IPR001480 -
Gso12g2026 831 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 827 - -
Gso12g2026 831 Gene3D - 176 307 IPR036426 -
Gso12g2026 831 ProSitePatterns Protein kinases ATP-binding region signature. 541 565 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g2026 Gso-Chr12 44354890 44357684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g2026 505 807 Receptor kinase-like Gene Family AT1G60800 44.051 6.18e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso12g2026 Pkinase 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g2026 - - gmx:100802928 1544.25