Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g2015 ATGATTGAGATGATAGTGTTCCTCTTCCTTGTCTTGCTTATATCCCTTATCTTGAGCAGCAGTTCCAATAATAGCCTCCAGCTTCCCCCAAGCCCACCAAGCATTCCTCTGCTAGGTCACCTCCACCACCTCACCCCTTCCCTATACAAATCCCTCTACACCCTCTCATCCAAGCACGGTCCCCTCCTCCTCCTCCGCCTCGGCCCCTCCCGCCGCCTCCTCCTCCTTGTCTCCTCCGCCGCCGTCGCCACCGATGTCTTCAAGACCCACGACCTCGCCTTCTCGTCGCGCCCCGCCTTCGCCTTCGCCGAGAGGCTCCCCTTCGGCACCTCCGGCTTCGTCACCGCCCCCTATGGGCCCTACTGGCGCTTCATGAAGAAACTCTGCGTCACGGAGCTTCTCTCCACGCGCCAACTTGAGCGCTCCAGGAGCATAAGGAGGGAAGAGATACTACGTTCCATCAAAAGGGTTATTGACAATGCTCGTGAGACTGTTGCACTTGATTTGGGCTCCGAGTTCACCAAATTCACCAACAATGTCACTTGCAGGACGGCCATGAGCACCAGTTGTGCGGAAAAATGCGAGGATGCTGAGAGGATCAGGAAGCTAGTAAAGGAGTCCTTTGAGCTAGCTGCGAAATTGTGCTTTGGTGATGTGTTGGGCCCTTTCAAGGAGTTGAGTTTTTGGGTGTATGGGAAAAAGGCCATAGACATGAGCACAAGGTACGATGAGTTGTTGGAAGAGGTGCTCAAGGAGCATGAACACAAAAGATTATCGCGTGCAAATGGTGATCAAAGTGAAAGGGATTTGATGGATATTCTGTTAGATGTTTATCATGATGCTCATGCAGAGTTCAAGATCACAATGGCTCATATTAAAGCCTTCTTTATGGATCTCTTCATTGCAGGCACACACACCTCAGCAGAAGCAACACAGTGGGCAATGGCCGAGCTCCTCAACCACCCTGAAGCATTTCAAAAGGTGAGAAAGGAGATAGAGTTAGTCACTGGCAATGTTAGGCTTGTTGATGAATCCGATATCACAAACTTGCCATATTTGCAAGCAGTTGTGAAGGAAACACTAAGACTCTACCCGCCGGCACCAATCACGACAAGAGAGTGTCGCCAACACTGCAAAATAAACAGCTTCGATGTGCCACCAAAGACAGCAGTGGCAATCAATTTGTATGCCATAATGAGAGACCCTGATTCTTGGGACAATCCTAATGAGTTTTGCCCTGAAAGGTTCTTGCAAGAACAAGATCATGAGGATTTGAGTGATGATGGTAAGAGAATGAAGTTCAATTTTGTTCCATTTGGAGGTGGGAGGAGAGGGTGTCCAGGGACAGCATTGGCATTCAGCTTGATGAACACTGCAGTTGCTGCTATGGTGCAGTGCTTTGATTGGAAAATTGGTAAAGATGGAAAAGGAGAAAAGGTTGATATGGAATCTGGGTCTGGTATGTCTTTGAGCATGGTTCACCCCCTTATTTGCGTTCCCGTAGTACATTTTATCCCATATGATATATTATATAATTCAATATAA 1545 0.4848 MIEMIVFLFLVLLISLILSSSSNNSLQLPPSPPSIPLLGHLHHLTPSLYKSLYTLSSKHGPLLLLRLGPSRRLLLLVSSAAVATDVFKTHDLAFSSRPAFAFAERLPFGTSGFVTAPYGPYWRFMKKLCVTELLSTRQLERSRSIRREEILRSIKRVIDNARETVALDLGSEFTKFTNNVTCRTAMSTSCAEKCEDAERIRKLVKESFELAAKLCFGDVLGPFKELSFWVYGKKAIDMSTRYDELLEEVLKEHEHKRLSRANGDQSERDLMDILLDVYHDAHAEFKITMAHIKAFFMDLFIAGTHTSAEATQWAMAELLNHPEAFQKVRKEIELVTGNVRLVDESDITNLPYLQAVVKETLRLYPPAPITTRECRQHCKINSFDVPPKTAVAINLYAIMRDPDSWDNPNEFCPERFLQEQDHEDLSDDGKRMKFNFVPFGGGRRGCPGTALAFSLMNTAVAAMVQCFDWKIGKDGKGEKVDMESGSGMSLSMVHPLICVPVVHFIPYDILYNSI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g2015 514 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 SUPERFAMILY Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gso12g2015 514 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 3 507 - -
Gso12g2015 514 Pfam Cytochrome P450 29 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g2015 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 507 - -
Gso12g2015 514 Gene3D Cytochrome P450 16 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g2015 Gso-Chr12 44258192 44261704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g2015 7 504 Cytochrome P450 AT2G42250 47.904 4.78e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g2015 K23814 - gmx:100790065 890.182