Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g2009 ATGGCTCAGAAGGCCGAGAAAAACGACACCGACTTTAAGGTCCCCGAAACCATCATCACCCCCTGCACCACCACCACCGCCACCTCGATTACCGAACCTTCTAGATTCTTCGACGCAACCACCCCCGCCACGTCATCGCGCTCCCCCAAGCGATCCCTCCCCCTCGACGACGAATCTCAGACGGACCAAACGGCGTCGTCGGAGCCCAAACGCGTCGTGAGCCGCTGCTCCTGCTGTCGGCGGCGCGTGGGGCTCACTGGATTCCGGTGCCGCTGTGGCGACCTCTTCTGCGCCGAGCACCGCTACTCCGACCGCCACGACTGCTCCTACGACTACAAGGCCGCAGGGAGAGAGGCCATAGCGAGAGAAAACCCCGTCGTGAAGGCCGCGAAGATCGTCAAGGTCTGA 408 0.6299 MAQKAEKNDTDFKVPETIITPCTTTTATSITEPSRFFDATTPATSSRSPKRSLPLDDESQTDQTASSEPKRVVSRCSCCRRRVGLTGFRCRCGDLFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g2009 135 Pfam AN1-like Zinc finger 76 113 IPR000058 GO:0008270
Gso12g2009 135 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 135 - -
Gso12g2009 135 SMART AN1_Zf_4 76 113 IPR000058 GO:0008270
Gso12g2009 135 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 135 - -
Gso12g2009 135 MobiDBLite consensus disorder prediction 23 71 - -
Gso12g2009 135 ProSiteProfiles Zinc finger AN1-type profile. 70 116 IPR000058 GO:0008270
Gso12g2009 135 MobiDBLite consensus disorder prediction 23 50 - -
Gso12g2009 135 Gene3D - 45 131 IPR035896 -
Gso12g2009 135 SUPERFAMILY AN1-like Zinc finger 58 129 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g2009 Gso-Chr12 44202489 44203442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g2009 61 135 C2H2 Transcription Factor Family AT3G52800 57.333 1.06e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g2009 - - gmx:100787421 250.366