Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1958 ATGACACCTCAATTTGCAGCAAGCCACTCTTTTTTCCGCGTTCCTCCCACTTCCCCTTCTCTCCGTTTCACAAGGAATAAAGATTTGATTCCAGAAAGATATACTATAATCAACAGGAAAAAGAATCATGCCATCACAGCTTTTGCAGGCAATTCTCTTGGAAAATCAGCTATCCAACTCAATGCTGCTTCATCTCCACTATTTGCTGATAAAGAAGCTCACCTCTCACTCAAACTTCCTATGTCTCGAAAATCCAATACTACAATCCGACAAGCATTTATATATCATTCATCTGGTTTCCGAATCCCATCAAATGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCCTGTGTTCCCTATCTGTTAGCATTGCAGATATCTGCAGCTGGGTTTTATCTAGAACCTATCCTTGAGAAATTTCCATTGTTTCGGAATTTGGTTTTTTATATCCCAGGAGCTGTCAACCGATTACCAAACTGGTTCCCTATGCTATATTGCAATGTGGCTATTGTATGGGTGGTAAAAAACAAGGACTTGCCCCTTATCTTCAGATTCCATTTAATGATGGGAATGCTACTGGAACATGCTCTGCAGATAGTGTGGATTTCAAGCAATTTCCTGCCACTTATACACTTCAAGGGAACTTTGGGGATGTATTACTGGGCTGGTGTGGCGTTGACATATATTTTTGTAATAATAAGGTGCATAAGGTGTGCACTTCTGGGTACATTTGTGAGTATCCCTCTACTTAGTGAATCAGCTTTTATTCATTCTCTATTTAGTTAA 789 0.4005 MTPQFAASHSFFRVPPTSPSLRFTRNKDLIPERYTIINRKKNHAITAFAGNSLGKSAIQLNAASSPLFADKEAHLSLKLPMSRKSNTTIRQAFIYHSSGFRIPSNAEKPEWWWRTLSCVPYLLALQISAAGFYLEPILEKFPLFRNLVFYIPGAVNRLPNWFPMLYCNVAIVWVVKNKDLPLIFRFHLMMGMLLEHALQIVWISSNFLPLIHFKGTLGMYYWAGVALTYIFVIIRCIRCALLGTFVSIPLLSESAFIHSLFS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1958 262 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 14 262 - -
Gso12g1958 262 Pfam Chloroplast import apparatus Tic20-like 80 255 IPR005691 -
Gso12g1958 262 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 14 262 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1958 Gso-Chr12 43582648 43584707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1958 63 262 Chloroplast and Mitochondria Gene Families AT4G03320 51.485 2.01e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1958 - - gmx:100783324 536.569