Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1956 ATGACGTCCGGCGCGAGGCAGCCGACGTGGAAGGAGCGGGAGAACAACAAGAGGCGGGAGAGGCGGAGGAGAGCTATCGCGGCGAAGATCTTCTCCGGCCTCAGAATGTACGGAAACTACAAGCTCCCGAAGCACTGCGACAACAACGAAGTTCTCAAGGCTCTCTGCAACGAAGCCGGCTGGACCGTCGAAGCCGACGGCACCACCTATCGCAAGGGATGCAAGCCTCCTGTTGAACGCATGGACATAGTAGGTGGTTCTGCAGCAGCAAGCCCGTGCTCATCTTACCATCCAAGTCCTTGTGCTTCCTACAACCCTAGTCCAGGCTCTTCTTGCTTACCGAGCCCTCGTGCATCCCCCTATCCTCCAAACCACAATGCTGATGGAAATTCTCTCATTCCATGGCTCAAAAACCTTTCATCAGGATCATCATCAGCATCCTCTTCCAAGCTTCCGCAGCTGTACATTCCAAACGGCTCCATCAGCGCTCCTGTCACTCCTCCAATCAGCTCTCCATCGTCTCGAAAGCCCCGAATCAACGCTGACTGGGAGGATCTGTCCACTCGTCCGGCAGCGTGGGGCGGACCTGCATACACCTTCCTGCCCTCTTCAACTCCTCCTAGCCCCGGTCGCCAGGTTGCTGAAACAGATTGGTTTTCCAAGATCAGGATTCCTCAGGTAGGACTAACACCAACTTCTCCAACCTTCAGCCTGGTCTCTTCCAACCCATTTGGCTTCAAGGAAGATGCTATGGGTGGCAGCGGTTCCCGCATGTGGACGACACCAGGGGCAAGTGGAACATGTTCTCCAGCTGTAGCTGCAGGCTCTGAAAACACTTCTGACATTCCAATGGCTGAAGCAGTTTCAGATGAATTTGCCTTTGGAAGCAGCTCATCAGTTTTAGTGAATGCCTGGAAAGGGGAGAGGATCCATGAAGCTTCTTTCGGAACAGATGATCTTGAGCTCACTCTTGGGAGCTCAAAAACCAGGCTACTCCATAAGTGA 1005 0.5383 MTSGARQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPPVERMDIVGGSAAASPCSSYHPSPCASYNPSPGSSCLPSPRASPYPPNHNADGNSLIPWLKNLSSGSSSASSSKLPQLYIPNGSISAPVTPPISSPSSRKPRINADWEDLSTRPAAWGGPAYTFLPSSTPPSPGRQVAETDWFSKIRIPQVGLTPTSPTFSLVSSNPFGFKEDAMGGSGSRMWTTPGASGTCSPAVAAGSENTSDIPMAEAVSDEFAFGSSSSVLVNAWKGERIHEASFGTDDLELTLGSSKTRLLHK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1956 334 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 330 - -
Gso12g1956 334 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 140 IPR008540 -
Gso12g1956 334 MobiDBLite consensus disorder prediction 1 21 - -
Gso12g1956 334 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 330 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1956 Gso-Chr12 43563678 43567226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1956 1 330 BZR Transcription Factor Family AT1G78700 67.552 1.49e-126 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gso12g1956 BES1_N 7e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1956 - - gmx:100813985 642.499