Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1939 ATGACTCAACCAGCCATGGCTACCTTCTCCAAGGAACGCGAGAACTTTGTCTATGTTGCCAAGTTAGCTGAACAAGCTGAACGCTATGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAATTGAGTGTGGAAGAGAGGAACCTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGCATGTTAAGCGTATCAGGGATTACAGGAACAAGGTGGAGTTGGAGCTGTCCAACATTTGCAGTGACATTATGATAGTTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACGGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAGGCTGGTAATGAAAAGAAAGAGGTGGCAGATCAGTCACTTAAAGCATATGAGACAGCTTCTACCACTGCTGAGAGTGAACTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGACCTGGATACCCTGAATGAGGATTCTTACAAGGACAGTACCTTGATTATGCAGCTGTTGAGGGATAACCTTACTTTATGGACTTCTGATATCCCCGAAGAGGGTGAGGACCAAAAAATGGAAAGCACAACCAGGGGAGAAGATGAGTTAGGCCGCTAG 798 0.4436 MTQPAMATFSKERENFVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELHVKRIRDYRNKVELELSNICSDIMIVLDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYETASTTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSDLDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEEGEDQKMESTTRGEDELGR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1939 265 SMART 1433_4 13 254 IPR023410 -
Gso12g1939 265 Gene3D - 2 256 IPR036815 -
Gso12g1939 265 Coils Coil 19 39 - -
Gso12g1939 265 PIRSF 14-3-3 7 254 IPR000308 -
Gso12g1939 265 Pfam 14-3-3 protein 20 241 IPR023410 -
Gso12g1939 265 MobiDBLite consensus disorder prediction 244 265 - -
Gso12g1939 265 PANTHER 14-3-3 PROTEIN 8 265 IPR000308 -
Gso12g1939 265 ProSitePatterns 14-3-3 proteins signature 2. 223 242 IPR023409 -
Gso12g1939 265 PANTHER GENERAL REGULATORY FACTOR 2 8 265 - -
Gso12g1939 265 MobiDBLite consensus disorder prediction 245 265 - -
Gso12g1939 265 PRINTS 14-3-3 protein zeta signature 45 74 IPR000308 -
Gso12g1939 265 PRINTS 14-3-3 protein zeta signature 94 118 IPR000308 -
Gso12g1939 265 PRINTS 14-3-3 protein zeta signature 125 147 IPR000308 -
Gso12g1939 265 PRINTS 14-3-3 protein zeta signature 160 186 IPR000308 -
Gso12g1939 265 PRINTS 14-3-3 protein zeta signature 187 213 IPR000308 -
Gso12g1939 265 PRINTS 14-3-3 protein zeta signature 214 243 IPR000308 -
Gso12g1939 265 SUPERFAMILY 14-3-3 protein 12 243 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1939 Gso-Chr12 43332895 43337026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1939 10 250 14-3-3 family AT2G42590 80.083 2.36e-146 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1939 12 43332895 43337026 Gso11g2912 11 44875806 44879668 GST