Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1926 ATGGCACAGTTACCTCCTAAAATACCAACCACACCCCAAAATTGGCCATCTTTTCCTCATCAAAGGGTACCCTCAATGGCCAACTTCAACCCCACAACCTCAACCACCACCATCGTCACCACTACAACTCCCCCACCGCCTTCATGGGTCGACGAGTTTCTAGACTTCTCGTCGGCCCGGCGGGGTGCCCATCGGCGATCTGCCAGCGACTCCATTACGTTCCTCGAGACACCGTTTCTCGAGGAATGCCGAACCGGTTTCGACCGGCTCGACGAGGACCAGCTCATTTCGATGTTCTCCGATGACATTGCTGTGGCGGCGCTGCCTCCGCCGCCGCTGTCGTCGGTGTCCAACCCCTCCTCGCCGACCTCCGACCAAAACAGCAGCGAGGAGAAGCCGATAGCAATGGCGCTGGACGTGAAGCCGAAGACGGAAAATGTTGAAGAGGAAAGCTCGAGCAAGGATGAGGAGGCGGCGGCGCCATCCTCCGTCACCGCCACCTGCACTGAAATCGTTGTTGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCTCAGAGGTCAAGGGTAAGAAAGCTACAATACATTTCTGAACTCGAAAGGAGCGTAACAACTTTGCAGACGGAGGTATCAGCATTATCACCGCGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGCATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCACCAAGAAGCATTAAAGAAGGAAATAGAGAGACTAAGGCAAATCTATCATCAACAGAACCTACAAAAGATGAACAACAACAACAACAATCTTCAACAAACTCCACCAACATCACAGCCACAACAACAACCAATGCAACTTCATCATCATCGACAGCAGCAGATAACAGTGTCTCAAACATTGGGATGCAAGGACAACAAGGAGCAGCTCCTCAGTTGA 978 0.5092 MAQLPPKIPTTPQNWPSFPHQRVPSMANFNPTTSTTTIVTTTTPPPPSWVDEFLDFSSARRGAHRRSASDSITFLETPFLEECRTGFDRLDEDQLISMFSDDIAVAALPPPPLSSVSNPSSPTSDQNSSEEKPIAMALDVKPKTENVEEESSSKDEEAAAPSSVTATCTEIVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMNNNNNNLQQTPPTSQPQQQPMQLHHHRQQQITVSQTLGCKDNKEQLLS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1926 325 MobiDBLite consensus disorder prediction 110 164 - -
Gso12g1926 325 MobiDBLite consensus disorder prediction 14 46 - -
Gso12g1926 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Gso12g1926 325 SMART brlzneu 172 236 IPR004827 GO:0003700|GO:0006355
Gso12g1926 325 SUPERFAMILY Leucine zipper domain 176 230 IPR046347 GO:0003700|GO:0006355
Gso12g1926 325 Coils Coil 255 275 - -
Gso12g1926 325 PANTHER BASIC LEUCINE ZIPPER 2 1 299 - -
Gso12g1926 325 PANTHER BASIC LEUCINE ZIPPER 34 1 299 - -
Gso12g1926 325 MobiDBLite consensus disorder prediction 278 313 - -
Gso12g1926 325 Pfam bZIP transcription factor 176 221 IPR004827 GO:0003700|GO:0006355
Gso12g1926 325 MobiDBLite consensus disorder prediction 1 46 - -
Gso12g1926 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 226 IPR004827 GO:0003700|GO:0006355
Gso12g1926 325 CDD bZIP_plant_RF2 177 227 IPR044759 GO:0003700|GO:0006355
Gso12g1926 325 MobiDBLite consensus disorder prediction 136 156 - -
Gso12g1926 325 Gene3D - 175 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1926 Gso-Chr12 43169675 43172931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1926 1 254 bZIP Transcription Factor Family AT3G58120 51.399 7.63e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso12g1926 bZIP_1 1.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1926 - - gmx:100820197 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1926 12 43169675 43172931 Gso11g2930 11 45059777 45063432 GST