Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1924 ATGAAGAAACCGAAGCAAACTCTGTTGAGCCCCAATTGGGTTCAACTTCAACAAAAGCTGAAGCTGAATGGCTCCAAGGCTTCAAGGACCTTCAAAACTTCAGATGAAGACACCCCAGAATCAATATTGGGGAAACGTAAAGAGAGACCAGATGATGAATCCAATGATTGTCAGATTAATCCTCTTGTTCCTGTAAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGCGTAGGTCAAGGAAACAAAAGTGCCCTTGGAAGAGTAACACTGGTCAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTCCGGCCAATTGAGCGAGTTGTTGACTTCCGCACTAAAATTAGTGGCATAAGACCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGGCTGCTCAGAAGAAAGTGGCAGAGTTGATCAATGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGATCTTAAGGCATTATTATTAAGTCATCCCAGAAAAGATATACGGGATACTTCTGAGTACCAACCATTTCTAAAGTCAAGTAGCAGAAGAGCACTGCGGCATCTTGCTGCCAAACATCTTGGTGTTAACATCCAAACAGGAGAGCACTGTCCAATAGAAGATGCTCGTGCTGCCATGCTGCTTTACCAAAGAAATAAAAAAGAATGGGAGAAGAGCATAAAAGATCAATTTCGGTTGAAACAGAAGCAAAGGAAATCAAAGCAAAAAAAGAAGCTGAAGAATGAACACACTTCAAATGGCAACCATGTTGAAATTTGA 798 0.4135 MKKPKQTLLSPNWVQLQQKLKLNGSKASRTFKTSDEDTPESILGKRKERPDDESNDCQINPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHPRKDIRDTSEYQPFLKSSSRRALRHLAAKHLGVNIQTGEHCPIEDARAAMLLYQRNKKEWEKSIKDQFRLKQKQRKSKQKKKLKNEHTSNGNHVEI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1924 265 Coils Coil 212 232 - -
Gso12g1924 265 CDD REX4_like 75 223 IPR037431 GO:0006364|GO:0008408
Gso12g1924 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 31 250 - -
Gso12g1924 265 SMART exoiiiendus 73 231 IPR013520 -
Gso12g1924 265 SUPERFAMILY Ribonuclease H-like 74 230 IPR012337 -
Gso12g1924 265 MobiDBLite consensus disorder prediction 24 60 - -
Gso12g1924 265 MobiDBLite consensus disorder prediction 238 265 - -
Gso12g1924 265 Gene3D - 70 250 IPR036397 GO:0003676
Gso12g1924 265 MobiDBLite consensus disorder prediction 30 55 - -
Gso12g1924 265 Pfam Exonuclease 75 222 IPR013520 -
Gso12g1924 265 PANTHER RNA EXONUCLEASE 4 31 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1924 Gso-Chr12 43147435 43151335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1924 74 228 C2H2 Transcription Factor Family AT5G40310 38.596 2.25e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1924 K18327 - gmx:100819122 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1924 12 43147435 43151335 Gso11g2933 11 45084888 45089029 GST