Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1913 ATGGCCGATGTGGCAGGTCTAGTTGAGGCATCGGGATCCAGATTCAGCTCATTGGAGCTTATTGGGCAGGGATCATTCGGAGACGTCTATAAAGCATTTGACAGGGAGCTCAACAAACTAGTCGCCATCAAAGTAATTGACTTGGAAGAATCAGAGGATGAAATTGATGATATCCAGAAGGAAATTTCTGTTCTGTCCCAATGTCGATGTCCATACATTACTGAATATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCAGTTGCTGATCTAATCCAATCAGGTCCTCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACAGTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGAATACAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGAATCACTGCAATTGAGATGGCAAAGGGGGAGCCGCCACTTGCTGATCTTCACCCAATGAGAGTGCTTTTCATTATACCCCGAGAGAATCCTCCACAGCTAGATGATCATTTTTCTCGTCCATTGAAAGAATTTGTGTCATTGTGCTTAAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATCCGGAATGCTAGGAAGAGTTCAAAGCTTTCAGAAAGAATAAGGGAGCGTCCAAAGTACCAAATAAAGGAAGATGAGGAGACACCCAGAAATGGTCCAAGTGGGATGGGGGAGGCATCAGGTACTGTAAAGGTGGCAAGAGATTTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAATGTTTCTCGACCACCTCAGTTTAGAGATAAGATAACTGAAGTTTCACATAATCAGCTTACTCAGCGAAAAGCTCCACAGAGTGGCTATCAAGGGGGATCTGTCAATAGAAGTGCACTTAATGAGTCACTTGAAAGTTCCTTTGGAAGAGATCTTAGAGTTCCCCACCATGATGAGCATCTGGATAATCACCTTGAAGATGATGAATTATCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGTCATCTGCGTTTCGTGACCAGAGCTCTCAGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGCTTCTTCAAGTGGAACTGTTGTTTTACGTGGCCAGCATGATGAGTCTGATTCTCCACAGACACCAAGGTCTCGACTGGGACTTAATGACAGAAATTCAAATGCCTCAATGGAAGATAGTGCAGCAAATCTTGCTGAGGCAAAGGCTGCTATCCTGAGGAAATCAAATGCTCGAGAGAAACTTGCCCGAGGAAAAATCAACAATGATAGACAGGAAAGCAAAAGAGATCAAAAGGCTAGTAGCTCTGATTCTTCAAGACCACATGGTGAATATGATGCACACAAGGGCATGTTAAGATCACATCATGCTAGTGATGGCGAAGAAAGTGCTAAAATAATGTCATCATCGGTGCCATTATCTGTTTTACTTATTCCTTCATTAAAAGAGGCTATTGCTGATGATCCAGAACTCGTGAGGGCAGTTATCAATTCTTTAATAAACATGGAGGGTACAAAACCTAAATCCTGTGATGTTTTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGGACTGGCAGACCAACTATTCAGCAAGACCAAGTCAGCTCAAGAAACCCGAAATGCAGAGGCTGATAACAGGAAGAAACAACAAAACAAGGAACATAATTCAAATAGCAATTTAAGCCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCCATCTTGA 2088 0.4224 MADVAGLVEASGSRFSSLELIGQGSFGDVYKAFDRELNKLVAIKVIDLEESEDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLIQSGPPLDEMSIACILRDLLHAVDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPLKEFVSLCLKKVPAERPSAKELLKDRFIRNARKSSKLSERIRERPKYQIKEDEETPRNGPSGMGEASGTVKVARDLRGEENNRPSDQGKTLKSAGWDFSIGGSQGTGTFRNVSRPPQFRDKITEVSHNQLTQRKAPQSGYQGGSVNRSALNESLESSFGRDLRVPHHDEHLDNHLEDDELSGNGSGTVVIRSPKGSRSSAFRDQSSQSSSSYASFEDASSSGTVVLRGQHDESDSPQTPRSRLGLNDRNSNASMEDSAANLAEAKAAILRKSNAREKLARGKINNDRQESKRDQKASSSDSSRPHGEYDAHKGMLRSHHASDGEESAKIMSSSVPLSVLLIPSLKEAIADDPELVRAVINSLINMEGTKPKSCDVFVKKLLQRLASSKEDSLKDLQGLADQLFSKTKSAQETRNAEADNRKKQQNKEHNSNSNLSPLARFLLSRWQGQTSRDLNPS* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1913 695 MobiDBLite consensus disorder prediction 274 495 - -
Gso12g1913 695 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1913 695 MobiDBLite consensus disorder prediction 311 325 - -
Gso12g1913 695 MobiDBLite consensus disorder prediction 512 564 - -
Gso12g1913 695 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 693 - -
Gso12g1913 695 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gso12g1913 695 MobiDBLite consensus disorder prediction 361 394 - -
Gso12g1913 695 CDD STKc_MST3_like 13 287 - -
Gso12g1913 695 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1913 695 MobiDBLite consensus disorder prediction 512 567 - -
Gso12g1913 695 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1913 695 Coils Coil 646 666 - -
Gso12g1913 695 MobiDBLite consensus disorder prediction 274 297 - -
Gso12g1913 695 MobiDBLite consensus disorder prediction 424 495 - -
Gso12g1913 695 MobiDBLite consensus disorder prediction 645 672 - -
Gso12g1913 695 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 693 - -
Gso12g1913 695 Gene3D Transferase(Phosphotransferase) domain 1 11 300 - -
Gso12g1913 695 SUPERFAMILY Protein kinase-like (PK-like) 13 294 IPR011009 -
Gso12g1913 695 MobiDBLite consensus disorder prediction 650 666 - -
Gso12g1913 695 MobiDBLite consensus disorder prediction 336 352 - -
Gso12g1913 695 Coils Coil 41 68 - -
Gso12g1913 695 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1913 Gso-Chr12 43019163 43030163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1913 1 692 MAP Kinase Kinase Kinase Kinase AT3G15220 66.429 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Gso12g1913 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1913 K08838 - gmx:100815042 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1913 12 43019163 43030163 Gso11g2946 11 45220940 45232258 GST