Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1911 ATGACTACCAGAGAAATCCTTCAAAAGATGAAGGTAAAAGTTGGTTTGGGTTCATCAGACCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGAACATAACTCATGGCTTTCATTTGGTGAAAGGAAAATCATATCATGACATGGAGGATTACGTTGTGGCTCAATTTAGGCAAATAGATAACAATGAATTGGGTTTGTTTGCAATATTTGACGGCCATGCGGGTCACAACGTACCTAATTACTTACGATCTCATTTGTTTGATAATATCTTACAAGAGCCTGACTTCTGGAAAGAACCTGCAGATGCTGTCAAGAGAGCATACAGTAAAACTGATTCTAGTATTTTAGAGATGTCGGGTGAATTAGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTAGTCAATTGTCATAAGTTAATAGTAGCCAACATTGGGGATTCTCGGGCTGTCTTATGTAAGAAGGGTGTGGCCAAACAACTATCAGTGGATCATGAGCCAACCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCTCGTGTTGATGGACGGCTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCATTTGTGACTGTGGAGATTATAGAGGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATTGTATCAGAAATATAAAGGATGCACGGTCTTCAGCAAAGCGCCTTACCGAAGAAGCAGTTAACAGGAAAAGCACCGATGATATCTCCTGCATTGTTGTAAAATTTCAGTGA 852 0.4002 MTTREILQKMKVKVGLGSSDPDSGKGKSKMSKNITHGFHLVKGKSYHDMEDYVVAQFRQIDNNELGLFAIFDGHAGHNVPNYLRSHLFDNILQEPDFWKEPADAVKRAYSKTDSSILEMSGELGRGGSTAVTAILVNCHKLIVANIGDSRAVLCKKGVAKQLSVDHEPTTEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTVEIIEDDAEFVILASDGLWKVMSNQEAVNCIRNIKDARSSAKRLTEEAVNRKSTDDISCIVVKFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1911 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Gso12g1911 283 SMART PP2C_4 25 280 IPR001932 -
Gso12g1911 283 CDD PP2Cc 36 282 IPR001932 -
Gso12g1911 283 Pfam Protein phosphatase 2C 48 275 IPR001932 -
Gso12g1911 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Gso12g1911 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Gso12g1911 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Gso12g1911 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Gso12g1911 283 Gene3D - 30 283 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1911 Gso-Chr12 42982038 42985667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1911 1 283 PP2C-type Phosphatase Gene Family AT3G15260 72.664 2.81e-159 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1911 K17506 - gmx:100500617 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1911 12 42982038 42985667 Gso11g2948 11 45268101 45271717 GST