Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1906 ATGGAACTTGAGATACGTGCTTGTCTCTTGTTGTTTCTCTTTAGTCTCTTCTCATGCTCTCAAGCCTACACTTTCTATGTTGGTGGGAAAGATGGGTGGGTTTTGTACCCTTCTGAGAATTACAATCATTGGGCTGAAAGGATGAGGTTCCAAGTCAGTGATACTCTTGTTTTTAAGTACAAGAAGGGCTCGGATACTGTGTTGGTGGTGAACAAGGATGATTATGAGAAATGTAACAAGAAGAACCCGATCAAGAAGTTTGAGGATAGTGAATCGGAGTTTCAGTTTGATCGATCGGGTCCATTTTACTTCATTAGTGGGAAAGATGGTAATTGTGAAAAGGGTCAGAAATTGATTATTGTGGTGTTGGCTGTGAGAGAGCCACCTCCTTATTATCCTCCAACACCTCCAAACACTCCCTATGTTCCAATTACTCCTCCAAAAGCACCTTATGTTCCAACACCTCCTCAAACTCCTCCAAAAATTCCTTATCCACCTTATGTTCCAACCCCTCCAAAAACACCTTCTCCTATTCACAGTCCTCCCTATGTTCCTCCTAAAGCACCTTCACCTACTAATCATCCTCCATTTATTCCAACTCCTCCACAAACTCCTTCCCCTGTTTATACTCCTCCTAATGTTCCAACACCTCCCAAAACACCTTCTCCTATTTACGCCCCCCCAATAGCTCCTTCCCCGGGTAACCATCCACCCTATGTTCCTACACCTCCAAAAACACCTTCTCCTTCTTATAGTCCTCCAAATGTTCCCACTCCTCCCAAAACACCTTCACCTATTTACACTCCACCAAATGTTCCCACTCCTCCAAAAACACCTTCTCCAGCTTATAGTCCTCCAAATGCTCCTTCTCCTCGTAACCAACCACCCTATATTCCAACACCTCCAAAAACACCGTCTCCTTCTTATAGTCCTCCAAATGTTCCCACTCCTCCAAAAACACCTTCCCCTGGCAACCAACCTTATGTCCCAACCCCTCCAAACACTCCCTCTCCTATTTCTCAACCTCCCTACACTCCAAACCCTCCAAAAACCCCTTCCCCTACCCATCAACCACCTTTTGTTCCAATAACCCCATCTCCATTTTCTCAACCACCTTATGTCCCAAAACCTCCAAAAACCCCCTCACCTTCTTCTCAGCCTCCTTTCACTCCAACACCTCCAAAAACCCCATCTCCAACATCTCAACCACCTTACATCCCCACACCTCCTTCTCCCATTTCCCAACCTCCTTCTATTGGAACACCTCCAAACACTCTTTCCCCAACATCTCAACCACCCTATCCATCCACCATCCCTCCCTCAACCTCACTCTCTCCATCTTACCCACCTTCACCTTCACCTTCATCTGCACCCACTTACCCACCTTCCTACCTGGCTCCGGCAACATCGCCACCATCCCCGTCGACGTCAGCCACCACTCCCACCATTTCTCCGGCAGCAACAACTCCCTCACCGTCGTCGTCGTCGTCGTCGGGGGCGTCGAACGAAACGACGCCAGCCAGACCAAACGGCGCGTCGTCTGTAGCACCGTCGAGGTTAGGGCTGTATTCACTGACCATTCTGGCTGGTGCTGCTCTAAGCACCATTCTTGGTTAG 1617 0.4811 MELEIRACLLLFLFSLFSCSQAYTFYVGGKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKGSDTVLVVNKDDYEKCNKKNPIKKFEDSESEFQFDRSGPFYFISGKDGNCEKGQKLIIVVLAVREPPPYYPPTPPNTPYVPITPPKAPYVPTPPQTPPKIPYPPYVPTPPKTPSPIHSPPYVPPKAPSPTNHPPFIPTPPQTPSPVYTPPNVPTPPKTPSPIYAPPIAPSPGNHPPYVPTPPKTPSPSYSPPNVPTPPKTPSPIYTPPNVPTPPKTPSPAYSPPNAPSPRNQPPYIPTPPKTPSPSYSPPNVPTPPKTPSPGNQPYVPTPPNTPSPISQPPYTPNPPKTPSPTHQPPFVPITPSPFSQPPYVPKPPKTPSPSSQPPFTPTPPKTPSPTSQPPYIPTPPSPISQPPSIGTPPNTLSPTSQPPYPSTIPPSTSLSPSYPPSPSPSSAPTYPPSYLAPATSPPSPSTSATTPTISPAATTPSPSSSSSSGASNETTPARPNGASSVAPSRLGLYSLTILAGAALSTILG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1906 538 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso12g1906 538 PANTHER EARLY NODULIN-LIKE PROTEIN 2 2 351 - -
Gso12g1906 538 PANTHER BLUE COPPER PROTEIN 2 351 IPR039391 GO:0009055
Gso12g1906 538 CDD OsENODL1_like 23 123 IPR041846 -
Gso12g1906 538 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gso12g1906 538 MobiDBLite consensus disorder prediction 470 518 - -
Gso12g1906 538 MobiDBLite consensus disorder prediction 152 518 - -
Gso12g1906 538 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Gso12g1906 538 MobiDBLite consensus disorder prediction 152 469 - -
Gso12g1906 538 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gso12g1906 538 Gene3D - 21 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1906 Gso-Chr12 42931629 42933720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1906 9 188 Phytocyanin Superfamily AT5G53870 50.000 9.64e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1906 - - gmx:100811987 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1906 12 42931629 42933720 Gso11g2955 11 45343680 45346476 GST