Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1853 ATGGCAGCAACATTGATGGCAGCAACAACAAGTTCTGGTACTCTTAAAGCAACTCCTTTCCTTGGCCAAGGCAAGGGTGCCAATGCCAATGCTCTTAGGGATGTTGTCTCCATGGGAACTGGGAAGTACACCATGGGCAATGATTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTCTCAGCTCAGACCCCTTCATACTTGAAAGGAGAATTCCCTGGGGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGATGGGCCATGCTTGGAGCACTAGGATGCATCACCCCAGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCTGGAGCCCAAATATTCTCCGAAGGTGGGCTTGACTATTTGGGAAACCCAAACCTTGTCCATGCACAAAGCATCCTGGCAGTGCTGGGCTTCCAAGTTATCCTAATGGGCCTTGTTGAAGGGTACCGCATCAATGGGCTTGATGGGGTGGGAGAGGGCAATGACCTCTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTAGCTGATGACCCAGTCACTTTTGCTGAGCTCAAAGTCAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGATTCTTTGTTCAAGCTATTGTCACTGGAAAAGGTCCATTGGAGAACCTTTTGGACCACCTAGACAACCCTGTGGCCAACAATGCTTGGGTCTATGCCACTAAGTTTTCCCCAGGGTCTTAA 807 0.5031 MAATLMAATTSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFSPGS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1853 268 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Gso12g1853 268 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 9 268 - -
Gso12g1853 268 SUPERFAMILY Chlorophyll a-b binding protein 49 264 - -
Gso12g1853 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 268 IPR001344 GO:0009765|GO:0016020
Gso12g1853 268 Gene3D Chlorophyll a/b binding protein domain 57 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1853 Gso-Chr12 42303115 42305035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1853 11 267 Chloroplast and Mitochondria Gene Families AT2G05070 66.917 1.03e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1853 K08914 - gmx:100779387 549.666