Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1823 ATGCCAACTGTGTGGTTCTCTTTGAAGAGATCTCTACATTGCAAATCAGAGCCATCAGATGTTCATGACCCCAAAACAAGGAAGCAATTGGCCACAATCTTGACCAAAAAGGGAGGTTCAAGTAGGTCAGGTTGTTCAAGGTCCATAGCCAATCTTAAAGATGTAATCCATGGGAGCAAGAGGCATCTAGAGAAGCCACCAAGTTGCAGCCCAAGATCCATTGGTAGCAGTGAGTTTCTCAACCCAATAACCCATGAGGTGATCCTAAGCAACTCAAGGTGTGAGCTGAAAATCACTGGCTATGGAGGGTTCCAAGAAGGAGGGGTTGGAAGTGATGGTGGAGGAGGTGCCAATAATCGAAGTGCCACAAGTGGTGACTTGAGTACCTTTGTGGGCACTTTAAGGCCTGGCACTCCTGGCCCTGGAGGGCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACTACTTCCACTCCTCCTAGGAAATCTCCTTTCCATTCATCGGATAAAGAAGGGTCAGGTTTGCATGGTGTTGGAGTACTTGGACTTCATTCTAGCACAAGGGTACCTCTTGAGACTGATTCAAATGTGTCTTCCACTGTCACTTGCCACAAATGTGGAGATCAATTCAACAAATGGGAAGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATATGCAGGACGAGCTGGTTGAAGTCTGAGAAACAATGTGGTAGAATTGAGAGAGTTTTGAAAGTGCATAACATGCAAAAGACTCTGGCTAGGTTTGAGGAGTATAGGGAGTTGGTGAAAATCAAGGCTAGTAAACTCCCCAAGAAGCATCCAAGGTGTCTTGCTGATGGCAATGAGCTTTTGAGGTTCTATGGAACCACTGTTGCATGCTCTCTTGGTCTCAGTGGCTCTTCCAGCTTGTGTTTATCTGAAAAGTGCTATGTTTGTAGAATCATCAGAAATGGGTTTTCTGCCAAGGAGGAGCTCAAGGGTGGAGTAGGTGTTTTCACTACTTCCACAAGTGGAAGGGCTTTTGAATGTATTAAGGTTTTTGACCATGACCCTTCATTGAGAAAAGCACTTATAGTCTGCAGGGTCATTGCTGGCAGGGTCCATAGACCACTGGAGAACATTCAGGAAATGGCAGGACAAACAGGCTTTGATTCATTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTCAATTCTAGAGGTCTTCTTCCTTGTTTTGTGGTAATTTGCAAGCCATGA 1311 0.4462 MPTVWFSLKRSLHCKSEPSDVHDPKTRKQLATILTKKGGSSRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGGVGSDGGGGANNRSATSGDLSTFVGTLRPGTPGPGGHPTMHYFNPSFRTTSTPPRKSPFHSSDKEGSGLHGVGVLGLHSSTRVPLETDSNVSSTVTCHKCGDQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSEKQCGRIERVLKVHNMQKTLARFEEYRELVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLSGSSSLCLSEKCYVCRIIRNGFSAKEELKGGVGVFTTSTSGRAFECIKVFDHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNSRGLLPCFVVICKP* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1823 436 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 436 - -
Gso12g1823 436 SUPERFAMILY ADP-ribosylation 227 435 - -
Gso12g1823 436 ProSitePatterns Zinc finger C2H2 type domain signature. 204 225 IPR013087 -
Gso12g1823 436 Gene3D - 217 435 - -
Gso12g1823 436 PANTHER - 2 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1823 Gso-Chr12 41922772 41925058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1823 1 436 C2H2 Transcription Factor Family AT5G54630 66.953 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1823 - - gmx:100816798 822.002