Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1802 ATGGTATCTACTTTATTAAAGCAGGTACGTTCTTCTCACCCAACAAAAACAATAACAAAAGTAATAACAACTTATTTATTTCTTTTCTTGAGCTTCCATGTTGGTCATGGACAACATGACTTCGAAAAATTTTCATCGTCCTTGTCGTCGCCGCCTCCGCCACACATGACGGAGCTCGATGCCTGCAACGGCGTGTTCCTCACGTACGCGCTCCTGGGGCGTGTGAAGGAGTACCCGCACGTGACGAACACGTCGAAGCAGGCGTGGGCTTTCAAGGCGGAGGCGTCCCTGACAAACGTCGGGGACGAAGAAGTGCCGGGGTGGAAGATGTTTGTCGGGTTCCAGCACCGCGAGATTCTAGTCTCCGCCGACGGCGCCGTGCTCATCGACGCTGGAGACTTTCCGGCGGAGGTGGGGAACGGGACCACGCTGGTGGGGACCGCCACGACCGACTTGAAGACCGCCATAGACACCGCCGGGGATATTAACCAGATGAGTGTGAGGATTCAGATGACGGGGACGCAGTTTGGGTTGGGTGCAGGGGCTACGCCAATGCCTAAAACTATTCGTCTCGAGAATGATGGCTTCAAATGCCCTGCACCTAGTCGAAGAGCCATGAGAATGTTCGTATGCTGCAAAAAGGACCCAAAAGTAAAAGCCAAGCAAGCAAAGAAAACAAAGTACCCACCTCGTCGCAAAGGAGACATAACCATAGCATACGACGTGCTCCAAGCCTTCCAGAACAACTACTACGCGGAAGTCAGAATAGACAACAACCACCCATTAGGTCGTCTTGATCACTGGAACCTAACATGGGAATGGCAAAAGGGAGAATTCATATACTCCATGAAAGGAGCCTTTGCTCGCAGAAAGGACCCTTCTGAGTGCTTATATGGTCTTGCAGGAAAGTTCTACAAAGACATGGATTTCTCAAATGTCGCCACGTGTGAGAAGAAGCCAACAATCTCTGATCTTCCATCAGAAAGAAAAGAAGATGAGAAAGTTGGGAAGCTCCCTTGGTGCTGTAGGAATGGCACTGTTTTGCCTCCTATCATGGACAAGAACAAAGCTAGGTCAATGTTCCAGATGCAAGTGTTCAAAATTGCACCTGACAGTGACAACAGAACTGCTCTCACTCCACCTACAAAGTGGAACATTGATGGTGTCATAAACCCTAAATACAAGTGCAGTGCCCCAGTTAGAGTTGACCCTCAAGTCTTCCCTGACCCTAGTGGGCTTAGGGCTATTACCACAGCAGTGGCAAGTTGGCAAATAGTTTGCAACATCACAAAACCTAAGCCTCAAGAAAACCGTTGCTGTGTCTCTTTCTCAGCATTCTACAACGAATCAGCCATCCCTTGCAACACGTGTGCATGTGGGTGTGATGACACGAGGAAGTGCAGCTCTAGGGCTTCACCGTTGCTTCTTCCACCAGATGCTCTTCTTGTGCCGTTTGTTAACAGGACCGTTAAGGCACGTGCATGGGCCAAGCTCAAGCACTTGCACGTGCCGAGCAAGCTCCCTTGTGGGGACAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCTGATCACAAGGATGGATGGACAGCTAGGATCACGCTTTTCAACTGGGAGGAATATTCCTTTGACGATTGGTTCACGGCTATTCAGTTGAAGAGGACTTTTGAGGATTTTCATGATGTTTATTCCTTCAATGGGACGAGGATTCCTGGTCTCAAAACTGTGTTCTTGGAGGGGTTAAAGGGTTTGAATTACTTGTCAGGAGAAACCAATGGAACACATGCTAATGACCCTAGGGTTCCAGGGAAACAACAATCTGTTCTTTCTTTCAGCAAGAAGCATATAAAAGACTTCGATGTCACACATGATGGGTTCCCCACTAAGGTTTTCTTCAATGGAATGGAGTGTTCACTTCCTCCAATTAGACCTGCCAAAAGTTCAGGGCACAAATCATCTTCCATCAGTGTCATTGCCCTCATTTTCACAGCTTTTGTGACTTTCTTGATGATCTAA 2016 0.4841 MVSTLLKQVRSSHPTKTITKVITTYLFLFLSFHVGHGQHDFEKFSSSLSSPPPPHMTELDACNGVFLTYALLGRVKEYPHVTNTSKQAWAFKAEASLTNVGDEEVPGWKMFVGFQHREILVSADGAVLIDAGDFPAEVGNGTTLVGTATTDLKTAIDTAGDINQMSVRIQMTGTQFGLGAGATPMPKTIRLENDGFKCPAPSRRAMRMFVCCKKDPKVKAKQAKKTKYPPRRKGDITIAYDVLQAFQNNYYAEVRIDNNHPLGRLDHWNLTWEWQKGEFIYSMKGAFARRKDPSECLYGLAGKFYKDMDFSNVATCEKKPTISDLPSERKEDEKVGKLPWCCRNGTVLPPIMDKNKARSMFQMQVFKIAPDSDNRTALTPPTKWNIDGVINPKYKCSAPVRVDPQVFPDPSGLRAITTAVASWQIVCNITKPKPQENRCCVSFSAFYNESAIPCNTCACGCDDTRKCSSRASPLLLPPDALLVPFVNRTVKARAWAKLKHLHVPSKLPCGDNCPVSINWHVSSDHKDGWTARITLFNWEEYSFDDWFTAIQLKRTFEDFHDVYSFNGTRIPGLKTVFLEGLKGLNYLSGETNGTHANDPRVPGKQQSVLSFSKKHIKDFDVTHDGFPTKVFFNGMECSLPPIRPAKSSGHKSSSISVIALIFTAFVTFLMI* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1802 671 PANTHER COBRA-LIKE PROTEIN 7 14 671 - -
Gso12g1802 671 PANTHER COBRA-LIKE PROTEIN 10 14 671 - -
Gso12g1802 671 Pfam COBRA-like protein 250 430 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1802 Gso-Chr12 41685970 41689505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1802 26 671 COBRA Gene Family AT3G20580 57.951 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1802 - - gmx:100789175 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1802 12 41685970 41689505 Gso11g3062 11 46498958 46501909 GST