Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1800 ATGGCTACCATCATTTTGAGGTCTAATGAAGTGGTTCATGCCTTGGGCTTGTTTTGCATCTTGCTGTTGGTGCACAAGGGTGATGCCTATGAATTTGTAGTTGGAGGGCAAAAGGGTTGGAGTATCCCAAGTGACCCCAATTCCAACCCTTACAGTCAATGGGCACAAAAGAGCCGATTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCCATCTGGCCAAGACTCAGTGATCCAAGTAAGTAGCCAAGACTATGCAAGTTGCAACACTGATGCATACAGTCAAAAATTCTCAGACGGCCACACAGTCATCAATCTCAACCAATCAGGGCCTCACTTCTTCATCAGTGGAAACAAAAACAGCTGTCTCAAAAATGAGAAGCTGGTGGTGATTGTGCTGGCAGACAGGAACAACAAAAACACAAACCAAACAAGCCCTCCCTCTCCTAATTCTCCTTCTCCTTCTCCTTCACTTTCAACACAGTCATTGGCTCCTTCACCAGCACCTTCTCAGCAAGTGGCTCCACCTCCACTTTCTCCAGTGGCAGCTCCTCCTCAGCAAGAGGCTCCTTCTCCACCATCTCCAGCCACAAATAACCCCACTCCAGCTCCTGTTAGTGATCAACCTTCTCCTCCTTCTCCTCCTCATAATGCTGCTTCTTCAATCTTGGTCAACTTTGCTTGTTCTGTTGGAGCGTTCATTGCTTCAGTTCTGGTTTTTTCTTTCTGA 729 0.4678 MATIILRSNEVVHALGLFCILLLVHKGDAYEFVVGGQKGWSIPSDPNSNPYSQWAQKSRFQVGDSLVFNYPSGQDSVIQVSSQDYASCNTDAYSQKFSDGHTVINLNQSGPHFFISGNKNSCLKNEKLVVIVLADRNNKNTNQTSPPSPNSPSPSPSLSTQSLAPSPAPSQQVAPPPLSPVAAPPQQEAPSPPSPATNNPTPAPVSDQPSPPSPPHNAASSILVNFACSVGAFIASVLVFSF* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1800 242 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
Gso12g1800 242 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 241 - -
Gso12g1800 242 MobiDBLite consensus disorder prediction 138 218 - -
Gso12g1800 242 CDD OsENODL1_like 30 133 IPR041846 -
Gso12g1800 242 Gene3D - 30 145 IPR008972 -
Gso12g1800 242 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gso12g1800 242 PANTHER BLUE COPPER PROTEIN 5 241 IPR039391 GO:0009055
Gso12g1800 242 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Gso12g1800 242 MobiDBLite consensus disorder prediction 169 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1800 Gso-Chr12 41669009 41670798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1800 11 170 Phytocyanin Superfamily AT3G20570 51.497 5.14e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1800 - - gmx:100788637 339.732