Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso12g1790 | ATGGCCTCTATGCCGTTGGGGCCGCAGCAACAGCTTCCACCGCCGCCGCCGCAACAACCGCCGCCAGCGGAGAATGACGCGATGAAAGTGGACTCTCGCGGCGGCTCCGACGCCGGCACCGAAAAGGAAATGTCAGCTCCTGTCGCAGATGGTAATGATGCACTCACTGGTCACATAATCTCAACCACAATTGCAGGCAAAAATGGCGAACCTAAACAAACCATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGCATTGTTTTCCAGGCGAAGTGCTTGGAGACTGGCGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAATCGTGAACTGCAGTTAATGCGCGTGATGGATCACCCAAATATAATTTCCTTGAGTAACTATTTCTTCTCTACAACAAGTAGAGATGAACTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTTCCGTGTTATAAAGCACTACAGTAGCATGAAACAGAGAATGCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCGTATATCCATACTGTACCAGGAATCTGCCATAGGGATTTGAAGCCTCAAAATCTTTTGGTTGATCGACTCACACACCAAGTCAAGCTCTGTGATTTTGGGAGTGCAAAAGTTCTGGTGGAGGGTGAATCAAACATTTCATACATATGTTCACGGTACTATCGTGCCCCAGAGCTAATATTTGGTGCGGCAGAATACACAACTTCTGTTGATATTTGGTCCGCTGGTTGTGTCCTTGCGGAACTTCTTCTAGGCCAGCCTTTGTTCCCAGGAGAAAATCAGGTTGACCAACTCGTGGAAATTATCAAGATTCTTGGCACTCCTACTCGAGAAGAAATTCGATGCATGAATCCTAATTATACAGATTTCAGATTCCCCCATATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCCCCAAAACTTCGTTACAGTGCAGTGGAAGCAATGGCACATCCTTTCTTTGACGAGCTTCGCGAGCCCAATGCCCGGCTACCTAATGGTCGTCCACTGCCTCCACTTTTCAACTTTAAACAGGAATTAGATGGAGCGCCCCCTGAACTGCTTCCTAAGCTCATCCCAGAGCATGTCAGGCGGCAAACCCAAATGTAA | 1230 | 0.4675 | MASMPLGPQQQLPPPPPQQPPPAENDAMKVDSRGGSDAGTEKEMSAPVADGNDALTGHIISTTIAGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMDHPNIISLSNYFFSTTSRDELFLNLVMEYVPETIFRVIKHYSSMKQRMPLIYVKLYTYQIFRGLAYIHTVPGICHRDLKPQNLLVDRLTHQVKLCDFGSAKVLVEGESNISYICSRYYRAPELIFGAAEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKILGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYSAVEAMAHPFFDELREPNARLPNGRPLPPLFNFKQELDGAPPELLPKLIPEHVRRQTQM* | 410 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso12g1790 | 409 | ProSiteProfiles | Protein kinase domain profile. | 77 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g1790 | 409 | SMART | serkin_6 | 77 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g1790 | 409 | Gene3D | Phosphorylase Kinase; domain 1 | 62 | 156 | - | - | |
Gso12g1790 | 409 | SUPERFAMILY | Protein kinase-like (PK-like) | 76 | 385 | IPR011009 | - | |
Gso12g1790 | 409 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672|GO:0006468 | |
Gso12g1790 | 409 | ProSitePatterns | Protein kinases ATP-binding region signature. | 83 | 107 | IPR017441 | GO:0005524 | |
Gso12g1790 | 409 | Gene3D | Transferase(Phosphotransferase) domain 1 | 157 | 404 | - | - | |
Gso12g1790 | 409 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Gso12g1790 | 409 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 24 | 407 | - | - | |
Gso12g1790 | 409 | PANTHER | SHAGGY-RELATED PROTEIN KINASE ETA-LIKE | 24 | 407 | - | - | |
Gso12g1790 | 409 | MobiDBLite | consensus disorder prediction | 8 | 23 | - | - | |
Gso12g1790 | 409 | Pfam | Protein kinase domain | 77 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g1790 | 409 | CDD | STKc_GSK3 | 72 | 364 | IPR039192 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso12g1790 | Gso-Chr12 | 41550530 | 41555376 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso12g1790 | 81 | 391 | MAP Kinase Gene Family | AT3G59790 | 35.583 | 2.98e-57 | 191 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_GSK | Gso12g1790 | Pkinase | 1.2e-64 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso12g1790 | K14502 | - | gmx:100806839 | 801.201 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1790 | 12 | 41550530 | 41555376 | Gso11g3074 | 11 | 46597279 | 46602150 | GST |