Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1784 ATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGTTCTCAGGATGAGATCTTAAGTAATAAGGAGTCTCCTCGACATTTTGACAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACACTCTGGCGCATTGGAGTGCTTTCAGAACCAATACCAAATGGTTTCTATTCAGTCATTCCGGAGACAAGACTCAAGGAACTTTTTGATAGTATTCCTACCTTGGACGAGCTTCATGCTCTGGGTGGAGAGGGTTTTAAGGCTGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGCTATCCATGTTAAAGAAATTAATTATGGCATTAGTTAGAGGATTAAACTCTAATCCAGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGTCCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAAGCTCTCACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGATGGAGCTATTGAATGTCAAGACTCATACAAGCATATGTCTGTGATCGTTGTATTAAATTCCGTGGAAATGCTGGTTGATCTTATGCGATTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCTAACAGCCCTTTATTTGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGCATCTTCAAATGTATCAGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATAGCAGTTTGAGTCCAGAACATCCATCATTTCGAGCACGTGGGCGGTCCATGCTTAGTGGTGATAGGACAACGTTTAGAGATTTTGCCGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGACAACACATCCTCGTCAGAAGCTCGTCGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGAGATGATATCGTAAGGGCTGTAAGGGCAATGAATGAAACTCTGAAGCAAAATCGTCTTTTGAGAGAACGAGGGGATGATAACTCATTCCCCAATTCTCCAAACAATAGTAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTCCATCTTGATGGCCATGATGAAAGATCTGCCCTCTATTCTTTTCAGCGTGACCAAGGAGCTTCACAAAAGGCAATGTCATTACCATCTTCACCACACGATTATGGAGGCCAGGCTTCTGAGAGAAGTGGATCATCAAGATACGGAGTGAATGATGAAATGGAGTCAACATGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAAAATGGAATATTGACTTCTCCGAATTGACTGTTGGAACTCGCGTAGGGATTGGTTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAACGAGATATCTATTCTGAGCCGGCTCCGACATCCTAATGTTATCTTGTTTCTTGGTGCTTGCACAAAGCCTCCACGCTTGTCAATGGTCACAGAATATATGGAGTTGGGATCATTGTATTACTTGATACATTTGAACGGTCAGAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTGCGTGACATATGCAAGGGTTTGATGTGCATACACAGAATGAAGGTTGTTCACCGTGATCTGAAAAGTGCAAATTGTCTAGTGAATAAGCATTGGACTGTCAAAATATGTGATTTTGGGCTTTCAAGAATAATGACAGAGTCTCCCATGAGAGATTCTTCATCAGCTGGAACGCCAGAATGGATGGCTCCTGAGCTTATTCGAAATGAACCGTTCACAGAAAAATGTGATATCTTCAGCCTTGGGGTGATAATGTGGGAACTCTGTACCTTGAACAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCTGTTGCGAATGAGGGTTCCAGATTGGAGATACCAGAAGGCCCTCTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAATGTCATGAACGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGGTGGACATCGAGTACTCCTTGTGCTGA 2343 0.42 MEETREDAGPAEQGPSNVSWWPSDFVEKFGSVSLGSQDEILSNKESPRHFDKDVLSSQKASQTLWRIGVLSEPIPNGFYSVIPETRLKELFDSIPTLDELHALGGEGFKADIILVDSEKDKKLSMLKKLIMALVRGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDESSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGAIECQDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISAGESDSAENDSCDSPLEPNSPLFGVSESAEKEENLQFHRRFEASSNVSGLSLRNVMLRSNSSLSPEHPSFRARGRSMLSGDRTTFRDFADDQATSRSSYRSDNTSSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSFPNSPNNSSSDANLQKNVSNFHLDGHDERSALYSFQRDQGASQKAMSLPSSPHDYGGQASERSGSSRYGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLNGQKKKLNWRRRLRMLRDICKGLMCIHRMKVVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAECHERPSCEEILSRLVDIEYSLC* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1784 780 MobiDBLite consensus disorder prediction 455 489 - -
Gso12g1784 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Gso12g1784 780 MobiDBLite consensus disorder prediction 418 433 - -
Gso12g1784 780 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Gso12g1784 780 MobiDBLite consensus disorder prediction 357 372 - -
Gso12g1784 780 MobiDBLite consensus disorder prediction 407 433 - -
Gso12g1784 780 ProSiteProfiles Protein kinase domain profile. 524 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1784 780 MobiDBLite consensus disorder prediction 1 22 - -
Gso12g1784 780 Pfam Protein tyrosine and serine/threonine kinase 525 772 IPR001245 GO:0004672|GO:0006468
Gso12g1784 780 SUPERFAMILY Protein kinase-like (PK-like) 498 772 IPR011009 -
Gso12g1784 780 MobiDBLite consensus disorder prediction 328 380 - -
Gso12g1784 780 CDD STKc_MAP3K-like 530 772 - -
Gso12g1784 780 Gene3D Phosphorylase Kinase; domain 1 517 602 - -
Gso12g1784 780 ProSitePatterns Protein kinases ATP-binding region signature. 530 551 IPR017441 GO:0005524
Gso12g1784 780 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 330 - -
Gso12g1784 780 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 331 778 - -
Gso12g1784 780 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 330 - -
Gso12g1784 780 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 331 778 - -
Gso12g1784 780 Gene3D Transferase(Phosphotransferase) domain 1 603 778 - -
Gso12g1784 780 SMART serkin_6 524 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1784 Gso-Chr12 41462928 41479271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1784 1 780 MAP Kinase Kinase Kinase AT3G58640 69.549 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Gso12g1784 PK_Tyr_Ser-Thr 4.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1784 - - gmx:100803469 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1784 12 41462928 41479271 Gso11g3079 11 46664459 46679642 GST