Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1783 ATGGACTCCATCGCCGGAGCTCCACCCCACGCCGACGTCACCCCTCCGCCGCCGCGGCCGTCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAGGCCACGTTCACCCTCATCGAAGCGTGGGGACAGCGCCACCTCGAACTCAACCGCGGCAACCTCCGCCAGCGCCACTGGCAGGAGGTCGCCGACGCCGTCAACGCCCTCCACGGCCACGTCAGCGCCAAGGCCCGCCGCACCGACGTCCAGTGCAAGAACCGCATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGCGACTCCGCCACCACCTGGCCCTTCTTCCGCCGCCTCGATTTCCTCATCGGCGACAATTTCCCCGCCAAAAAGCCCTCCCCTCCGCCGCCGTCCTCCGCCGGAGTAACCCGTCGGAGCACCCCCCCGGCCAAGTCCCCGCTGTGGCCCGTCATTCCCGTCGGCCCTCGATCCGGCACCAAGAAGCGGCCGGCGCAGGCGAAGCCGGCGTCGGCCTCGCCAGATAGTGTCGCCGACTCGTACTTCCGCCGGAATTTCTCGGTGTTCGCCGCCGCCGCCGCCGCCGCCGCGGCGGAGGCCGACAGCGAGAATTCGGATGGGTCAAAATGGAGCAGTGGGAGTGAGAAAGGGACGATGAAGAAGAAAAGAGGAAGAGGAGATTGGGAATTTGGGTACAGAGAGATGGCAGAGGCGTTGGAGAGGTTTGGGGAGATTTATGAGAGAGTGGAAGAAGCGAAACAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAGTTCGCCAAGGATTTGGAAACCCAGAGAATGAAACTCTTCATGGAAACGCAGGTTCACTTGCAGAAAATCAACCGCTCCAAACGTTCTTCTGCTTCTGACAATGTTTCGTAG 924 0.6234 MDSIAGAPPHADVTPPPPRPSPFPGREDCWSEEATFTLIEAWGQRHLELNRGNLRQRHWQEVADAVNALHGHVSAKARRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLDFLIGDNFPAKKPSPPPPSSAGVTRRSTPPAKSPLWPVIPVGPRSGTKKRPAQAKPASASPDSVADSYFRRNFSVFAAAAAAAAAEADSENSDGSKWSSGSEKGTMKKKRGRGDWEFGYREMAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQVHLQKINRSKRSSASDNVS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1783 307 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 3 304 IPR044823 -
Gso12g1783 307 Coils Coil 240 271 - -
Gso12g1783 307 MobiDBLite consensus disorder prediction 203 229 - -
Gso12g1783 307 Gene3D - 30 97 - -
Gso12g1783 307 MobiDBLite consensus disorder prediction 1 27 - -
Gso12g1783 307 Pfam Myb/SANT-like DNA-binding domain 27 120 IPR044822 -
Gso12g1783 307 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 3 304 - -
Gso12g1783 307 MobiDBLite consensus disorder prediction 126 181 - -
Gso12g1783 307 MobiDBLite consensus disorder prediction 10 24 - -
Gso12g1783 307 SMART 118neu2 37 128 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1783 Gso-Chr12 41452118 41457363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1783 223 294 Trihelix Transcription Factor Family AT3G14180 46.575 3.43e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso12g1783 Myb_DNA-bind_4 1.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1783 - - gmx:100784918 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1783 12 41452118 41457363 Gso11g3080 11 46683096 46687852 GST