Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1779 ATGGCTGCCTCCAAGGATCGCGAGAACTTCGTCTACATCGCCAAGCTCGCCGAACAGGCCGAGCGATACGAAGAGATGGTGGAATCAATGAAGAACGTTGCGAATCTCGACGTTGAACTGACTGTGGAGGAGCGGAATTTACTTTCTGTTGGGTACAAGAATGTGATTGGTGCTCGGAGAGCATCGTGGAGGATCCTGTCTTCCATTGAGCAAAAGGAAGAAACAAAAGGGAACGAGTTGAATGCGAAGCGGATTAAGGAGTACAGGCAGAAGGTTGAATTGGAGCTTTCAAACATCTGTAATGATGTTATGACAGTGATTGATGAGCACCTTATCCCTTCGGCTGCAGCTGGTGAATCCACTGTGTTTTACTATAAGATGAAAGGAGATTATTATCGTTATCTTGCCGAATTTAAGGCAGGCAATGAGAAGAAGGAAGCTGCTGATCAGTCTATGAAAGCATATGAGTCTGCTACCACTGCAGCAGAGGCTGATTTACCTCCAACACATCCCATCCGATTGGGTCTAGCTTTAAATTTCTCAGTTTTCTATTACGAGATCTTGAACTCTCCAGAAAGAGCCTGTCATCTTGCAAAACAAGCTTTTGATGAAGCTATTTCTGAGCTTGACACCTTGAATGAGGAGTCATACAAAGACAGCACCTTAATCATGCAACTTCTCAGGGACAACCTAACTTTGTGGACTTCTGACATCCCAGAAGATGGAGAAGATGCCCAGAAAGTGAATGGCACTGCCAAGCTTGGTGGAGGTGAGGAGGCAGAGTGA 786 0.4555 MAASKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMTVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKAGNEKKEAADQSMKAYESATTAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGGGEEAE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1779 261 Coils Coil 13 33 - -
Gso12g1779 261 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Gso12g1779 261 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Gso12g1779 261 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Gso12g1779 261 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Gso12g1779 261 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Gso12g1779 261 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Gso12g1779 261 Pfam 14-3-3 protein 14 235 IPR023410 -
Gso12g1779 261 PANTHER 14-3-3 PROTEIN 3 246 IPR000308 -
Gso12g1779 261 Coils Coil 195 215 - -
Gso12g1779 261 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Gso12g1779 261 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Gso12g1779 261 SMART 1433_4 7 248 IPR023410 -
Gso12g1779 261 PIRSF 14-3-3 1 247 IPR000308 -
Gso12g1779 261 MobiDBLite consensus disorder prediction 238 261 - -
Gso12g1779 261 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Gso12g1779 261 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 246 - -
Gso12g1779 261 Gene3D - 1 249 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1779 Gso-Chr12 41400766 41404097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1779 1 261 14-3-3 family AT2G42590 82.129 3.65e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1779 K06630 - gmx:100801348 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1779 12 41400766 41404097 Gso11g3084 11 46740568 46743817 GST