Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1765 ATGGATTACTTCGACCATGATCATGATCATGACCCATTCCACGACCACGACGACTTCAACAGAAGGATACTCATCATGGCCATAGTTTCCTTATCAGTGGTCTTGGTTCTTGTCTTTGCACTTCACCTCTACGCAAGGGTTTTCCTCCGCCGCCAAACTCGCCGCAGAGCCGCCATATACCAACTGAGCCTCAACGTGGCACAAGCACACGCCGAGCCACACAACAACACAGGGCTGAACCCTGCCCTCATCACCACCCTTCCCACCTTCCCCTTCAAACAAAACCAACACCATGATTCTGCTGAGTGTGCCGTGTGCTTGAGCGTTCTAGAAGACGGAGAACACGTGAGGCTTCTTCCCAATTGCAAACACAGCTTCCACGTCAGCTGCATCGACACGTGGCTTTCTTCGCACTCCACGTGTCCCATTTGTCGGACCAAGGCCGGACCGGTCCAGCTCGAACCGGTCCGCCTCGAACCTCAGCCCCGTGAGGGCCCCACTGGCTTGGTTCTTGCTGATGTTGTTGCACCCACGGCTCCTCTATTGTTTGAAAACGTGGAAGGAACCTCGGATGGTGCTAATAATAATGGGTCACCTAAGGTTAGTGGTTCGAATTCGAGGTTGAGTTCGTTCAGAAGGATTCTCAGTAGGGAGAGATCGATGAGGAGGATTCTACCTTCTAGCCATGATGATGTTGAACATGACTTAGAGAGGCAGTGA 720 0.5236 MDYFDHDHDHDPFHDHDDFNRRILIMAIVSLSVVLVLVFALHLYARVFLRRQTRRRAAIYQLSLNVAQAHAEPHNNTGLNPALITTLPTFPFKQNQHHDSAECAVCLSVLEDGEHVRLLPNCKHSFHVSCIDTWLSSHSTCPICRTKAGPVQLEPVRLEPQPREGPTGLVLADVVAPTAPLLFENVEGTSDGANNNGSPKVSGSNSRLSSFRRILSRERSMRRILPSSHDDVEHDLERQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1765 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 150 IPR013083 -
Gso12g1765 239 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 7 239 - -
Gso12g1765 239 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Gso12g1765 239 PANTHER RING FINGER DOMAIN-CONTAINING 7 239 - -
Gso12g1765 239 MobiDBLite consensus disorder prediction 187 209 - -
Gso12g1765 239 SMART ring_2 103 144 IPR001841 -
Gso12g1765 239 CDD RING-H2_PA-TM-RING 102 145 - -
Gso12g1765 239 MobiDBLite consensus disorder prediction 188 209 - -
Gso12g1765 239 Pfam Ring finger domain 102 145 IPR001841 -
Gso12g1765 239 SUPERFAMILY RING/U-box 83 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1765 Gso-Chr12 41248996 41250138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1765 1 238 C3H Transcription Factor Family AT2G42360 45.098 1.06e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1765 K19038 - gmx:100780265 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1765 12 41248996 41250138 Gso11g3097 11 46876682 46877893 GST