Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1764 ATGTCGAAGAGAGAAGAATTTGCTCTGTGGCACTTCTTTTTTCTTCTTCTTCTTCTATGGGGGTTTGTCGGCGGCGACGCGCCGGGGAGGGAGGTGTGGTGCGTGGCGAAGAACAACGCGGAGGACACGGCGCTGCAATCGGCGGTGGAGTGGGCTTGCGGCGCAGGCGGAGCCGATTGCGGAGCGATTCAGGGAGGAGGACCCTGCTTCGACCCTTCCAGTATGCAGAATACGGCGTCGTATGCTTTCAATGATTATTTCCGCAAACACGCTATCTCTGAAGAGAATTGCAACTTCGGCAACAACGCCGCCATTACCTCCTTCAACCCCAGTTTTGGTAATTGTAAGCTCCCTTCTAGTTTGTTAGTGAACAATGGGAGTTTCTCGGGATCGGTGTCTTCTATGGGATTGATGCCCGGGGAAGAAACGAGTGGGTGCGGTGGAGTTGTTTGGAGGTGGTGGCTTGCGCCATTTATTGTCACTACACATTTTTTGTTTATGCCAGTTTCAATTTCACGGATTGTTTAA 528 0.517 MSKREEFALWHFFFLLLLLWGFVGGDAPGREVWCVAKNNAEDTALQSAVEWACGAGGADCGAIQGGGPCFDPSSMQNTASYAFNDYFRKHAISEENCNFGNNAAITSFNPSFGNCKLPSSLLVNNGSFSGSVSSMGLMPGEETSGCGGVVWRWWLAPFIVTTHFLFMPVSISRIV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1764 175 Pfam X8 domain 33 103 IPR012946 -
Gso12g1764 175 Gene3D - 29 124 - -
Gso12g1764 175 SMART X8_cls 32 117 IPR012946 -
Gso12g1764 175 PANTHER BETA-1,3 GLUCANASE 24 130 - -
Gso12g1764 175 PANTHER BETA-1,3 GLUCANASE 24 130 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1764 Gso-Chr12 41240587 41241671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1764 33 118 Glycoside Hydrolase AT4G34480 47.674 1.15e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1764 - - gmx:100795871 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2153 6 41244214 41250260 Gso12g1764 12 41240587 41241671 PCT