Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso12g1744 | ATGAAGCGTTATGTCTACATTGATGATGATGAATCATCTCATGATATTTACTGTGATAATCGTATATCAAACAGAAAATATACTGTATTAAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGTTATGGCCTCTCATTACTCCAGTAAATCCTGTCAGTACATGGGGTCCTCTTATCTTTATTTTTGCTGTCTCTGCATCAAAAGAGGCGTGGGATGATTACAATAGATATCTTTCAGACAAGAAAGCAAATGAGAAGGAAGTCTGGGTTGTCAAGAAGGGCATCAAGAAACATATCCAAGCCCAGGATGTTCATGTAGGTAACATAGTATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGCACCTCTGATCCTCAAGGAGTTTGCTATATAGAGACAGCTGCGCTGGATGGTGAAACTGATCTAAAGACACGGGTCATACCTTCTGCTTGCATGGGAATCGATGTTGATCTATTGCACAAAATTAAGGGTGTAATTGAGTGTCCCTATCCAGATAAAGACATCAGGAGATTTGATGCAAACATGCGGCTGTTTCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACCATTCTTCAGTCATGTTACTTGAGAAACACTGAGTGGGCATGTGGAGTGGCTGTGTATACAGGCAATGAAACCAAAATGGGCATGTGTAGAGGTATACCAGAACCAAAGCTCACTGCTATGGATGCTATGATTGACAAGTTGACTGGTGCTATATTTATATTCCAAATTGTTGTTGTTCTGGTTCTTGGGATAGCGGGTAATGTTTGGAAGGATACAGAAGCTAAGAAGCTATGGTATGTTCTTTACCCTCATGAAGGTCCCTGGTATGAACTGTTGGTCATCCCTTTGCGATTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTTTCGCTGGATTTGGTGAAGAGCTTGTATGCAAAATTTATTGACTGGGACCATCAAATGATTGACCTAGAGACTAGTATTCCATCCCATGCAACGAATACAGCGATAAGTGAGGACCTGGGACAAGTTGAGTACATTTTGACTGACAAAACAGGCACCCTCACAGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCAATTTCTATGGAAATGAGAATGGAGATGCATTGAAAGATGTAGAGCTTCTCAATGCTGTTTCCAGTGGTTCTTCTGACGTTGTACGATTTCTTACAGTTATGGCAATATGTAATACCGTCATACCTACACAAAGCAAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCCCTTGTCCATGCTGCTTCTCGATTGCATATGGTTTACTTTAATAAGAGTGGAAATATTCTTGAAGTCAAGTTCAGCACTTCAATACTTCAGTATGAAGTCCTGGAAACCTTAGAGTTTACCTCTGATAGGAAAAGAATGTCAGTAGTGTTAAAAGATTGCCAAAATGGAAAGATCCTTCTCTTGTCAAAAGGAGCAGATGAGGCTATTCTTCCATATGCCCGTGCTGGGCAGCAGACCCGACATTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGATTACGTACATTATGTTTGGCTTGGCGTGAGTTAAAGAGAGATGAATATCGAGAATGGTCTTTGATGTTTAAAGAGGCCAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGTCAACGAGTAGAACATGACTTGGAAATTCTTGGTGTAACAGCAATAGAGGATCGTTTACAGGATGGAGTGCCTGAAACGATAGAAACACTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACTGGAGACAAGCAGAATACTGCAATACAAATTGCTCTGTCGTGTAATTTTATTTCACCAGAACCAAAGGGACAGCTTCTATCAATTGATGGCAAAACAGAGGAGGAGGTTTGTAGGAGTTTAGAGAGAGTGCTCCGTACTATGCGGATAACTACCTCAGAACCCAAGGATGTGGCTTTTGTTGTTGATGGCTGGGCACTTGAGATTGCACTTACCCACTATCGTAAAGCTTTCACTGAGCTGGCAGTTTTGTCAAGGACTGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGCTTGTACAGATCTTAAAATCATGTGATTATAGAACATTGGCTATTGGTGATGGTGGGAATGATGTAAGGATGATACAGCAAGCTGATATTGGTGTGGGCATCAGTGGCAGGGAAGGATTACAGGCAGCAAGAGCAGCTGATTATAGTATTGGAAAGTTTAGATTCCTGAAGAGATTAATTCTGGTCCATGGCCGCTACTCCTACAACCGTACAGCATTTCTTTCTCAATATTCATTCTATAAGTCCCTACTGATATGCTTCATCCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACTAGCCTCTTCAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTATACTAGTGTTCCTGTTCTAGTTAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGATGCAGCATCCTCAAATTTTATTTTACTGCCAAGCAGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTATTTGTGATAAGCATACATGCCTACGCTTTTGATAAAAGTGAAATGGAGGAGGTTTCAATGGTTGCACTTTCCGGGTGTATATGGTTGCAGGCTTTTGTAGTAACAATGGAGACCAATTCCTTTACTATATTGCAACATATGGCTATATGGGGTAATTTGGCTGCCTTTTATGTCATCAACTGGATCTTCAGCACGCTTCCTTCATCAGGGATGTATACAATTATGTTTCGGTTGTGTCGACAACCGTCATATTGGATAGCAATTTTTCTCATGGTTGCAGCGGGGATGGGTCCAATTCTAGCCATCAAGTACTTCCGATATACATATAGACCGAGCAAAATCAATACACTTCAGCAAGCTGAACGTCTGGGTGGGCCTATTTTGTCTCTTGGCACCATTGAGCCTCAGCCGAGATCTATAGAGAAAGATGTTTCTACCTTGTCAATAACACAACCCAAAAACAGAAATCCTGTGTATGAACCTCTGTTATCAGATTCTCCAAATGCCTCCAGAAGATCTTTTGGAGCAGGAACACCATTTGATTTTTTCCAGTCACAATCAAGATTATCAGTGTCGTCTAGCTACACACGAAATTGCAAGGACAACTGA | 3324 | 0.4061 | MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDVHVGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVDLLHKIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVYTGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWYVLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAVSSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAASRLHMVYFNKSGNILEVKFSTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQTRHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAFDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHMAIWGNLAAFYVINWIFSTLPSSGMYTIMFRLCRQPSYWIAIFLMVAAGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLGTIEPQPRSIEKDVSTLSITQPKNRNPVYEPLLSDSPNASRRSFGAGTPFDFFQSQSRLSVSSSYTRNCKDN* | 1108 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 152 | 166 | - | - | |
| Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 379 | 393 | - | - | |
| Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 628 | 638 | - | - | |
| Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 750 | 769 | - | - | |
| Gso12g1744 | 1107 | SUPERFAMILY | HAD-like | 374 | 805 | IPR036412 | - | |
| Gso12g1744 | 1107 | CDD | P-type_ATPase_APLT | 19 | 907 | - | - | |
| Gso12g1744 | 1107 | Pfam | E1-E2 ATPase | 99 | 292 | - | - | |
| Gso12g1744 | 1107 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 386 | 573 | IPR023299 | GO:0000166 | |
| Gso12g1744 | 1107 | Gene3D | - | 445 | 592 | IPR023299 | GO:0000166 | |
| Gso12g1744 | 1107 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso12g1744 | K01530 | - | gmx:100786505 | 2186.38 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso12g1744 | 12 | 41062745 | 41077564 | Gso11g3115 | 11 | 47048472 | 47063607 | GST |
Showing 1 to 1 of 1 entries