Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso12g1744 | ATGAAGCGTTATGTCTACATTGATGATGATGAATCATCTCATGATATTTACTGTGATAATCGTATATCAAACAGAAAATATACTGTATTAAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGTTATGGCCTCTCATTACTCCAGTAAATCCTGTCAGTACATGGGGTCCTCTTATCTTTATTTTTGCTGTCTCTGCATCAAAAGAGGCGTGGGATGATTACAATAGATATCTTTCAGACAAGAAAGCAAATGAGAAGGAAGTCTGGGTTGTCAAGAAGGGCATCAAGAAACATATCCAAGCCCAGGATGTTCATGTAGGTAACATAGTATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGCACCTCTGATCCTCAAGGAGTTTGCTATATAGAGACAGCTGCGCTGGATGGTGAAACTGATCTAAAGACACGGGTCATACCTTCTGCTTGCATGGGAATCGATGTTGATCTATTGCACAAAATTAAGGGTGTAATTGAGTGTCCCTATCCAGATAAAGACATCAGGAGATTTGATGCAAACATGCGGCTGTTTCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACCATTCTTCAGTCATGTTACTTGAGAAACACTGAGTGGGCATGTGGAGTGGCTGTGTATACAGGCAATGAAACCAAAATGGGCATGTGTAGAGGTATACCAGAACCAAAGCTCACTGCTATGGATGCTATGATTGACAAGTTGACTGGTGCTATATTTATATTCCAAATTGTTGTTGTTCTGGTTCTTGGGATAGCGGGTAATGTTTGGAAGGATACAGAAGCTAAGAAGCTATGGTATGTTCTTTACCCTCATGAAGGTCCCTGGTATGAACTGTTGGTCATCCCTTTGCGATTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTTTCGCTGGATTTGGTGAAGAGCTTGTATGCAAAATTTATTGACTGGGACCATCAAATGATTGACCTAGAGACTAGTATTCCATCCCATGCAACGAATACAGCGATAAGTGAGGACCTGGGACAAGTTGAGTACATTTTGACTGACAAAACAGGCACCCTCACAGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCAATTTCTATGGAAATGAGAATGGAGATGCATTGAAAGATGTAGAGCTTCTCAATGCTGTTTCCAGTGGTTCTTCTGACGTTGTACGATTTCTTACAGTTATGGCAATATGTAATACCGTCATACCTACACAAAGCAAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCCCTTGTCCATGCTGCTTCTCGATTGCATATGGTTTACTTTAATAAGAGTGGAAATATTCTTGAAGTCAAGTTCAGCACTTCAATACTTCAGTATGAAGTCCTGGAAACCTTAGAGTTTACCTCTGATAGGAAAAGAATGTCAGTAGTGTTAAAAGATTGCCAAAATGGAAAGATCCTTCTCTTGTCAAAAGGAGCAGATGAGGCTATTCTTCCATATGCCCGTGCTGGGCAGCAGACCCGACATTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGATTACGTACATTATGTTTGGCTTGGCGTGAGTTAAAGAGAGATGAATATCGAGAATGGTCTTTGATGTTTAAAGAGGCCAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGTCAACGAGTAGAACATGACTTGGAAATTCTTGGTGTAACAGCAATAGAGGATCGTTTACAGGATGGAGTGCCTGAAACGATAGAAACACTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACTGGAGACAAGCAGAATACTGCAATACAAATTGCTCTGTCGTGTAATTTTATTTCACCAGAACCAAAGGGACAGCTTCTATCAATTGATGGCAAAACAGAGGAGGAGGTTTGTAGGAGTTTAGAGAGAGTGCTCCGTACTATGCGGATAACTACCTCAGAACCCAAGGATGTGGCTTTTGTTGTTGATGGCTGGGCACTTGAGATTGCACTTACCCACTATCGTAAAGCTTTCACTGAGCTGGCAGTTTTGTCAAGGACTGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGCTTGTACAGATCTTAAAATCATGTGATTATAGAACATTGGCTATTGGTGATGGTGGGAATGATGTAAGGATGATACAGCAAGCTGATATTGGTGTGGGCATCAGTGGCAGGGAAGGATTACAGGCAGCAAGAGCAGCTGATTATAGTATTGGAAAGTTTAGATTCCTGAAGAGATTAATTCTGGTCCATGGCCGCTACTCCTACAACCGTACAGCATTTCTTTCTCAATATTCATTCTATAAGTCCCTACTGATATGCTTCATCCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACTAGCCTCTTCAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTATACTAGTGTTCCTGTTCTAGTTAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGATGCAGCATCCTCAAATTTTATTTTACTGCCAAGCAGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTATTTGTGATAAGCATACATGCCTACGCTTTTGATAAAAGTGAAATGGAGGAGGTTTCAATGGTTGCACTTTCCGGGTGTATATGGTTGCAGGCTTTTGTAGTAACAATGGAGACCAATTCCTTTACTATATTGCAACATATGGCTATATGGGGTAATTTGGCTGCCTTTTATGTCATCAACTGGATCTTCAGCACGCTTCCTTCATCAGGGATGTATACAATTATGTTTCGGTTGTGTCGACAACCGTCATATTGGATAGCAATTTTTCTCATGGTTGCAGCGGGGATGGGTCCAATTCTAGCCATCAAGTACTTCCGATATACATATAGACCGAGCAAAATCAATACACTTCAGCAAGCTGAACGTCTGGGTGGGCCTATTTTGTCTCTTGGCACCATTGAGCCTCAGCCGAGATCTATAGAGAAAGATGTTTCTACCTTGTCAATAACACAACCCAAAAACAGAAATCCTGTGTATGAACCTCTGTTATCAGATTCTCCAAATGCCTCCAGAAGATCTTTTGGAGCAGGAACACCATTTGATTTTTTCCAGTCACAATCAAGATTATCAGTGTCGTCTAGCTACACACGAAATTGCAAGGACAACTGA | 3324 | 0.4061 | MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDVHVGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVDLLHKIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVYTGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWYVLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAVSSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAASRLHMVYFNKSGNILEVKFSTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQTRHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAFDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHMAIWGNLAAFYVINWIFSTLPSSGMYTIMFRLCRQPSYWIAIFLMVAAGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLGTIEPQPRSIEKDVSTLSITQPKNRNPVYEPLLSDSPNASRRSFGAGTPFDFFQSQSRLSVSSSYTRNCKDN* | 1108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 152 | 166 | - | - | |
Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 379 | 393 | - | - | |
Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 628 | 638 | - | - | |
Gso12g1744 | 1107 | PRINTS | P-type cation-transporting ATPase superfamily signature | 750 | 769 | - | - | |
Gso12g1744 | 1107 | SUPERFAMILY | HAD-like | 374 | 805 | IPR036412 | - | |
Gso12g1744 | 1107 | CDD | P-type_ATPase_APLT | 19 | 907 | - | - | |
Gso12g1744 | 1107 | Pfam | E1-E2 ATPase | 99 | 292 | - | - | |
Gso12g1744 | 1107 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 386 | 573 | IPR023299 | GO:0000166 | |
Gso12g1744 | 1107 | Gene3D | - | 445 | 592 | IPR023299 | GO:0000166 | |
Gso12g1744 | 1107 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - | |
Gso12g1744 | 1107 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 385 | 1106 | - | - | |
Gso12g1744 | 1107 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 381 | 387 | IPR018303 | - | |
Gso12g1744 | 1107 | Gene3D | - | 75 | 252 | - | - | |
Gso12g1744 | 1107 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 424 | 1023 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Gso12g1744 | 1107 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 778 | 1017 | IPR032630 | - | |
Gso12g1744 | 1107 | SFLD | p-type atpase | 362 | 801 | IPR044492 | - | |
Gso12g1744 | 1107 | Gene3D | - | 602 | 790 | IPR023214 | - | |
Gso12g1744 | 1107 | Pfam | Phospholipid-translocating ATPase N-terminal | 5 | 70 | IPR032631 | - | |
Gso12g1744 | 1107 | Pfam | Cation transport ATPase (P-type) | 436 | 532 | - | - | |
Gso12g1744 | 1107 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 385 | 1106 | - | - | |
Gso12g1744 | 1107 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - | |
Gso12g1744 | 1107 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 600 | 662 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gso12g1744 | 1107 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 717 | 834 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gso12g1744 | 1107 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 14 | 1016 | IPR023298 | - | |
Gso12g1744 | 1107 | SFLD | Haloacid Dehalogenase | 362 | 801 | - | - | |
Gso12g1744 | 1107 | SUPERFAMILY | Calcium ATPase, transduction domain A | 100 | 248 | IPR008250 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso12g1744 | Gso-Chr12 | 41062745 | 41077564 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso12g1744 | 1 | 1107 | Primary Pumps ATPases | AT5G44240 | 86.360 | 0.0 | 2018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso12g1744 | K01530 | - | gmx:100786505 | 2186.38 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1744 | 12 | 41062745 | 41077564 | Gso11g3115 | 11 | 47048472 | 47063607 | GST |