Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1737 ATGCAGAAACCAATTTCAATTTGGCTGAGTTTTTCTTCCATTTTCAGTCCTTTGCCAATGTCTCCACTTAAGCTCCTTGTCATTCTTCTTCACACTGTAACCATTTTTACTTCAGCTTCCACTACTGAATTTGTCTACAACACAAACTTCAACACCACAAATATCATCCTATATGGAAATGCCTCTATTGAGACCTCCATTCTTACTCTCACAAATCAAAGTTTCTTCTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAACTAGCCAACTCTTCCACCTTTCTCCCCTTTGCAACCTCCTTCATTTTCTCAGTTGTCCCCATTAAAAACTTTATCACTGGTCATGGCTTTGTCTTCCTATTCACGCCATCAAGCGGTGTAAATGGCACGACCTCAGCTGAGTATATCGGTCTTTTCAATCGCAGCAATGAAGGCAATCCTCAGAACCACGTTTTTGGAGTCGAGTTTGATCCAGTTAAAAATGAAGAAGAGTTCAACGATATAAGCGACAATCATGTCGGTGTCGACATAAACTCGCTTCGTTCCTCAACTTCACACGAGGCTGGTTATTGGGGTGGAAAAGGTGACAAAGAATTTAAGGTGTTGGATTTCAAAAATGGAGAAAACTATCAGGTATGGATTGAATTTATGCATTCCCAGCTTAACGTTACTATGGCTCGGGCGGGACAAAAGAAGCCTCGAGTGCCTCTTATCAGCAGTAATGTCAACCTTTCAGGCGTTCTTATGGATGAAACATACGTTGGATTCACTGCAGCAACAGGGAGGATAATAGACAGTGCTAAGATTCTTGCTTGGAGTTTTAGTGATTCAAATTTTTCAATTGGTGATGCATTAGTGACAGAAAATTTGCCTTCATTTGTTCATCATAAAAAGTGGTTTCCTGGAGCACAAGCTTTCGCGGTAGGTGTCACCAGTATTGTGTTTGTGTTAATCATTAGTTGTGGTTATGTAGCATTTTTCGTTCTCCGCAGAAGAAAGACACAAGAAGAAGTTGAAGATTGGGAACTGGAGTATTGGCCTCACAGGATTGGTTTCCATGAGATCGATGCAGCAACAAGGGGGTTTTCTGAAGAGAATGTGGTTGCTGTAGGAGGGACCGGGAAGGTATATAAAGGGGTTTTGCATGGGGTAGAAGTTGCAGTCAAGAGAATTCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCCTTGGCAGAATGAAGCACAGAAATTTAGTAGGATTAAGAGGCTGGTGCAAAAAAGAAAAGGGAAATTTGATTCTAGTTTATGACTTCATGAGCAATGGAAGTTTAGACAAATGGATATTTGAGTGTGAAGAGGGAATGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCACAGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATTAAAGCAAACAATGTTCTTCTTGATAAGGACATGAATGCAAGGCTGGGAGATTTCGGATTGGCTCGTATGCATGATCATCAGGGACAAGTGGTCAGCACAACAAGAGTAATAGGGACAGTAGGATACATTGCTCCTGAAGTGATTCAAAGAGGAACAGCGTCAACTTTGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTGGAAGTAATTTGCGGACGAAGACCTATTGAAGAACATAAGCCGGGGCTAATTGAATGGCTGATGTCCTTAATGGTGCAAGGCCAATTGCACAGTGCAGTTGATGAAAGGTTGAAGGCTAAAGGGGGATACACCATAGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCACATACAGACCCTAGTATTAGACCAACAATGAGGCAGGTTGTGAAAATTTTGGAGGTGGAAATTGACAGCATTGAGTCTGATGAAGATAACATGGAAATGAGTTTGCTTGGAAAAATAAGATCAGCTACTACGTGGTCTAGAGCTGAATGTGCTTTACCATACAGTGGTTACCCTTCTTTTGATGAAGTTAAGATGTTCAGTTTTAATTCTAGGACTTCTAGAAGTGGCTCAAGTACCTTTCTAGGATCAGAATCAGAAATCACCAGAGAAAACATATGA 2130 0.4127 MQKPISIWLSFSSIFSPLPMSPLKLLVILLHTVTIFTSASTTEFVYNTNFNTTNIILYGNASIETSILTLTNQSFFSIGRAFYPHKIPTKLANSSTFLPFATSFIFSVVPIKNFITGHGFVFLFTPSSGVNGTTSAEYIGLFNRSNEGNPQNHVFGVEFDPVKNEEEFNDISDNHVGVDINSLRSSTSHEAGYWGGKGDKEFKVLDFKNGENYQVWIEFMHSQLNVTMARAGQKKPRVPLISSNVNLSGVLMDETYVGFTAATGRIIDSAKILAWSFSDSNFSIGDALVTENLPSFVHHKKWFPGAQAFAVGVTSIVFVLIISCGYVAFFVLRRRKTQEEVEDWELEYWPHRIGFHEIDAATRGFSEENVVAVGGTGKVYKGVLHGVEVAVKRIPQEREEGMREFLAEVSSLGRMKHRNLVGLRGWCKKEKGNLILVYDFMSNGSLDKWIFECEEGMMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKANNVLLDKDMNARLGDFGLARMHDHQGQVVSTTRVIGTVGYIAPEVIQRGTASTLSDVFGFGILVLEVICGRRPIEEHKPGLIEWLMSLMVQGQLHSAVDERLKAKGGYTIEEAERLLHLGLLCSHTDPSIRPTMRQVVKILEVEIDSIESDEDNMEMSLLGKIRSATTWSRAECALPYSGYPSFDEVKMFSFNSRTSRSGSSTFLGSESEITRENI* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1737 709 Gene3D Transferase(Phosphotransferase) domain 1 441 656 - -
Gso12g1737 709 SUPERFAMILY Protein kinase-like (PK-like) 340 635 IPR011009 -
Gso12g1737 709 CDD STKc_IRAK 374 635 - -
Gso12g1737 709 Pfam Protein kinase domain 369 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1737 709 SMART serkin_6 365 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1737 709 PANTHER LECTIN RECEPTOR KINASE 20 697 - -
Gso12g1737 709 ProSiteProfiles Protein kinase domain profile. 365 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1737 709 Gene3D Phosphorylase Kinase; domain 1 327 440 - -
Gso12g1737 709 CDD lectin_legume_LecRK_Arcelin_ConA 42 278 IPR001220 GO:0030246
Gso12g1737 709 Gene3D - 40 285 - -
Gso12g1737 709 PANTHER - 20 697 - -
Gso12g1737 709 Pfam Legume lectin domain 42 281 IPR001220 GO:0030246
Gso12g1737 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Gso12g1737 709 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 280 IPR013320 -
Gso12g1737 709 MobiDBLite consensus disorder prediction 689 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1737 Gso-Chr12 40987380 40989783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1737 40 582 Receptor kinase-like Gene Family AT4G04960 57.895 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso12g1737 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1737 - - gmx:100776006 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1737 12 40987380 40989783 Gso11g3125 11 47149239 47152378 GST
Gso12g1737 12 40987380 40989783 Gso12g0942 12 11219509 11221898 PCT
Gso12g1737 12 40987380 40989783 Gso6g2397 6 45586674 45589110 PCT