Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1731 ATGAAGCAGTCTCTTCTGCTGAGAGGCGAAAGCAGTGACCAGAGTTACCAGTCGCGGGGAATATTCCGGCGCTCCGATGCTATCGCCTACGGCTCCAACTACGAGAAAGCCGCTGCGTTCATCGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGGAAATTCTCGACTCACCAAACTTCCAAAATTACATAAGATTTTATTTTATATTCACTAAATGCAATCTAATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAGCCTCTATGGTGTAAAAAGCTTACCACAAATTCCTGCAACGATAGAGAGTATTTCTTTTTGGGACAATTGCCATATCTAACTGATGCAGAATGTCTTATTTATGAGGGAATAACTCTTGTTTTGCTAATCATACATACGTTCTTCCCATTGTCATACGAAGGATCCCGCATATATTGGAAAAATACTATTAATCAATTGAAGGTTTTCTCTCTATTAGTGCTAGTTGCTGATGTGATGCTCTATGCCCTTTTCTTGTCTCCACTGGCTTTTGATTTTCTACCTTTTAGAATTGCACCTTATATCAGAGTTGTTCTTTTCGTTCTGAATATTAGGGAGCTACGAGAAACCATCATTATCTTGGTTGGGATGCTTGACACATACTTAAATGTCTTGGCTTTGTGGCTTCTGTTTCTTCTTTTTGCTAGCTGGGTGGCGTATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACATTGTATCAGCTGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCACGTTGGTATTGCCTGTTTTTCATACTATTTGTGCTGGTGGGGGTTTACTTTGTTACAAACTTAATCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTCGTAAAACAAGTTTTTGAGAAGGATTGTTTGAGAAGGAATGTGTTGGACAAAGCTTTTGATCTCTTGGATACGCATAAAGTTAGTAGTCTCAACAAAAATCAATGCATTAGGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAAAATCTCCAGGGAAGACTTTGAATTGATATTTGATGAGCTGGATGATAGTCATGATATAAAGATCAACAAGGATGAATTTGCGGATATTTGCAATGCCATTGCTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGAGTATTTATCATTCTACCATTCACCCAGCTCAAAGAGATTAAAAGAATTCGTGAGGAGTCCTATGTTTGGATACCTAGTGTCCTTTGTTCTCGTACTAAATCTGGTGGCTGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAAAGGTGTGGCAAATGGTTGAGTTCGTTTTCGGGTGGGTATATGTAATAGAAATGGTTTTAAAGATTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAACCGCTTTGATTTTATTGTCACGGTGACAATTGCCATTGGAGAAACTGTAACTTTTGCTGTACCTGATGATGATCTTCCTTTCATCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGATTAATAAGGATCCTAATGTATGTCAAGCGATACCGAGCCTTTGTGGCAACTTTATTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTACCTTGTGTATTTATTGTTCAATTGGAGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCCGAATTGGAATTAACAGCTCTTGCTGAAAATGACTATTTGGTTTTCAATTTCAATGATTACCCGAATGGAATTGTGACACTTTTCAATTTTCTTGTCACGGCAACCTGGGACGAAGTAATGACAAGCTACAAGGAATTAACTGGGACTTCTTGGACCTATTTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTTTAAACTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCCGAAATGGAACTTGAGTCATCAGAAACTTGTGAAGGAAATGACAAGGAAGTTGAAGGAGATAAATATCGAAAGCGGTCTATTGGCACAAAAACACGAAGCCAGAGGGTTGATGCTCTTCTTCATCATATGTTGAGTGCTGAATTGTGTCAAAATGAGTCTTCCAGTACACAAACTTCATAA 2220 0.382 MKQSLLLRGESSDQSYQSRGIFRRSDAIAYGSNYEKAAAFIDLAEDGVGLPEEILDSPNFQNYIRFYFIFTKCNLIWSLSYFALIVLNFLEKPLWCKKLTTNSCNDREYFFLGQLPYLTDAECLIYEGITLVLLIIHTFFPLSYEGSRIYWKNTINQLKVFSLLVLVADVMLYALFLSPLAFDFLPFRIAPYIRVVLFVLNIRELRETIIILVGMLDTYLNVLALWLLFLLFASWVAYVFFEDTIQGKTVFTSYGTTLYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFILFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDCLRRNVLDKAFDLLDTHKVSSLNKNQCIRLFEELNKYRTLPKISREDFELIFDELDDSHDIKINKDEFADICNAIALKFQKEDVMSYFEYLSFYHSPSSKRLKEFVRSPMFGYLVSFVLVLNLVAVIIETTLDIENNSAQKVWQMVEFVFGWVYVIEMVLKIYAYGFENYWRDGQNRFDFIVTVTIAIGETVTFAVPDDDLPFISNGEWIRYLLLARMLRLIRILMYVKRYRAFVATLLTLIPSLMPYLGIIFCTLCIYCSIGVQIFGGIVNAGNPELELTALAENDYLVFNFNDYPNGIVTLFNFLVTATWDEVMTSYKELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMELESSETCEGNDKEVEGDKYRKRSIGTKTRSQRVDALLHHMLSAELCQNESSSTQTS* 740
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1731 739 Gene3D - 204 316 - -
Gso12g1731 739 Pfam Ion transport protein 132 313 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso12g1731 739 Pfam Ion transport protein 432 679 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso12g1731 739 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 734 IPR044581 GO:0005245
Gso12g1731 739 SUPERFAMILY EF-hand 325 396 IPR011992 -
Gso12g1731 739 Gene3D - 423 557 IPR027359 -
Gso12g1731 739 Gene3D - 321 398 - -
Gso12g1731 739 Gene3D - 558 717 - -
Gso12g1731 739 SUPERFAMILY Voltage-gated potassium channels 431 678 - -
Gso12g1731 739 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso12g1731 Gso-Chr12 40928226 40953714 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1731 23 738 Ion Channels AT4G03560 66.527 0.0 1017
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1731 K16900 - gmx:100819307 1437.55