LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso12g1731	ATGAAGCAGTCTCTTCTGCTGAGAGGCGAAAGCAGTGACCAGAGTTACCAGTCGCGGGGAATATTCCGGCGCTCCGATGCTATCGCCTACGGCTCCAACTACGAGAAAGCCGCTGCGTTCATCGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGGAAATTCTCGACTCACCAAACTTCCAAAATTACATAAGATTTTATTTTATATTCACTAAATGCAATCTAATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAGCCTCTATGGTGTAAAAAGCTTACCACAAATTCCTGCAACGATAGAGAGTATTTCTTTTTGGGACAATTGCCATATCTAACTGATGCAGAATGTCTTATTTATGAGGGAATAACTCTTGTTTTGCTAATCATACATACGTTCTTCCCATTGTCATACGAAGGATCCCGCATATATTGGAAAAATACTATTAATCAATTGAAGGTTTTCTCTCTATTAGTGCTAGTTGCTGATGTGATGCTCTATGCCCTTTTCTTGTCTCCACTGGCTTTTGATTTTCTACCTTTTAGAATTGCACCTTATATCAGAGTTGTTCTTTTCGTTCTGAATATTAGGGAGCTACGAGAAACCATCATTATCTTGGTTGGGATGCTTGACACATACTTAAATGTCTTGGCTTTGTGGCTTCTGTTTCTTCTTTTTGCTAGCTGGGTGGCGTATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACATTGTATCAGCTGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCACGTTGGTATTGCCTGTTTTTCATACTATTTGTGCTGGTGGGGGTTTACTTTGTTACAAACTTAATCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTCGTAAAACAAGTTTTTGAGAAGGATTGTTTGAGAAGGAATGTGTTGGACAAAGCTTTTGATCTCTTGGATACGCATAAAGTTAGTAGTCTCAACAAAAATCAATGCATTAGGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAAAATCTCCAGGGAAGACTTTGAATTGATATTTGATGAGCTGGATGATAGTCATGATATAAAGATCAACAAGGATGAATTTGCGGATATTTGCAATGCCATTGCTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGAGTATTTATCATTCTACCATTCACCCAGCTCAAAGAGATTAAAAGAATTCGTGAGGAGTCCTATGTTTGGATACCTAGTGTCCTTTGTTCTCGTACTAAATCTGGTGGCTGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAAAGGTGTGGCAAATGGTTGAGTTCGTTTTCGGGTGGGTATATGTAATAGAAATGGTTTTAAAGATTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAACCGCTTTGATTTTATTGTCACGGTGACAATTGCCATTGGAGAAACTGTAACTTTTGCTGTACCTGATGATGATCTTCCTTTCATCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGATTAATAAGGATCCTAATGTATGTCAAGCGATACCGAGCCTTTGTGGCAACTTTATTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTACCTTGTGTATTTATTGTTCAATTGGAGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCCGAATTGGAATTAACAGCTCTTGCTGAAAATGACTATTTGGTTTTCAATTTCAATGATTACCCGAATGGAATTGTGACACTTTTCAATTTTCTTGTCACGGCAACCTGGGACGAAGTAATGACAAGCTACAAGGAATTAACTGGGACTTCTTGGACCTATTTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTTTAAACTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCCGAAATGGAACTTGAGTCATCAGAAACTTGTGAAGGAAATGACAAGGAAGTTGAAGGAGATAAATATCGAAAGCGGTCTATTGGCACAAAAACACGAAGCCAGAGGGTTGATGCTCTTCTTCATCATATGTTGAGTGCTGAATTGTGTCAAAATGAGTCTTCCAGTACACAAACTTCATAA	2220	0.382	MKQSLLLRGESSDQSYQSRGIFRRSDAIAYGSNYEKAAAFIDLAEDGVGLPEEILDSPNFQNYIRFYFIFTKCNLIWSLSYFALIVLNFLEKPLWCKKLTTNSCNDREYFFLGQLPYLTDAECLIYEGITLVLLIIHTFFPLSYEGSRIYWKNTINQLKVFSLLVLVADVMLYALFLSPLAFDFLPFRIAPYIRVVLFVLNIRELRETIIILVGMLDTYLNVLALWLLFLLFASWVAYVFFEDTIQGKTVFTSYGTTLYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFILFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDCLRRNVLDKAFDLLDTHKVSSLNKNQCIRLFEELNKYRTLPKISREDFELIFDELDDSHDIKINKDEFADICNAIALKFQKEDVMSYFEYLSFYHSPSSKRLKEFVRSPMFGYLVSFVLVLNLVAVIIETTLDIENNSAQKVWQMVEFVFGWVYVIEMVLKIYAYGFENYWRDGQNRFDFIVTVTIAIGETVTFAVPDDDLPFISNGEWIRYLLLARMLRLIRILMYVKRYRAFVATLLTLIPSLMPYLGIIFCTLCIYCSIGVQIFGGIVNAGNPELELTALAENDYLVFNFNDYPNGIVTLFNFLVTATWDEVMTSYKELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMELESSETCEGNDKEVEGDKYRKRSIGTKTRSQRVDALLHHMLSAELCQNESSSTQTS*	740

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso12g1731	739	Gene3D	-	204	316	-	-
	Gso12g1731	739	Pfam	Ion transport protein	132	313	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Gso12g1731	739	Pfam	Ion transport protein	432	679	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Gso12g1731	739	PANTHER	TWO PORE CALCIUM CHANNEL PROTEIN 1	1	734	IPR044581	GO:0005245
	Gso12g1731	739	SUPERFAMILY	EF-hand	325	396	IPR011992	-
	Gso12g1731	739	Gene3D	-	423	557	IPR027359	-
	Gso12g1731	739	Gene3D	-	321	398	-	-
	Gso12g1731	739	Gene3D	-	558	717	-	-
	Gso12g1731	739	SUPERFAMILY	Voltage-gated potassium channels	431	678	-	-
	Gso12g1731	739	ProSiteProfiles	EF-hand calcium-binding domain profile.	366	401	IPR002048	GO:0005509

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso12g1731	Gso-Chr12	40928226	40953714	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso12g1731	23	738	Ion Channels	AT4G03560	66.527	0.0	1017

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso12g1731	K16900		-	gmx:100819307	1437.55

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