Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1730 ATGGCGTCTTTACCTTCTAGTCGCAGCAACGGTGGTTCCAACGGCTTTGATTTGGGTTCCGGCGACATCCTTTGTTCGTACGAGGAGGACAATACCAACCACGATTCTTCTGACGGCACTCACATCGATCCCGCCAAGGGTTCTCATGCATCAAGGATGGCAAGAACATCAGTAGTTCCTGCTACAGCCTATAGTTCGTCTGAAGATTCTTTGAGCCAGGATGTGATTGCAATTGTTGAGAAGAGTATGAAAACACATGCTGACAACCTTATGCGGTTTCTTGAGGGACTTAGTACAAGGCTGTCACAGTTGGAATTATATTGTTACAATCTTGACAAATCAATTGGAGCAATGCAATCTGATTTAACTTGTGACCATGAGGAAACAGATTCAAAACTCAAATCTCTTGATAAACACCTTCAGGAAGTACACAGGTCTGTGCTAATTTTGAGAGACAAGCAAGAGCTAGCTGAGACTCGGAAAGAATTAGCCAAGCTTAAACATGTTCGGAAAGAATCATCTTCCTCAAGCCATTTGCAGTCAAATGAGGAGAGATCTTCACCTTCTTCCATGGATCCAAAAAGAATTGATAATGTATCTGACACACAGAACCAAGAGCTAGCTCTTGCCTTACCACATCAAGTTGCACCCCGGCAACAGCCTGTGGCATCCTCCTATCAAGTGCCAGCCCCAAATGTGAGCCAAGCCACTCAACGACCTCATTATTACTTGATGCCCACCCATTTGCCCAATCCACAAGCTGTTACTCAGCTTCCTCAGAATCAGTATTTGCCTTCTGATCCACAGTATCGAATTCCACTATCAACATCATCATCTCAGGTAATCCAATCCCCACCTGTGCAACAATTTTCACAGTATCAGCAGCTACAGTACCAACAACAGCAATGGGCTCCACAGTTACCACCACAGCAGGTGCAAGTGCCACCTCCACAACCACCCTCAGCAGTGTCTCAAGTGAGACCCCCCTCAACAAATGTTTACACTCCATATGCTACCAGCCAAGCTACAAATCCTCTTCCCACAGAAACACTACCAAACAGTGTGCCAATGCAAATGCCTTATTCAGGAATTCCACCCCAAGGATCTAGCAGTGGTGGTGGCGGCAGTGATGCTATGCCATATGGATATAGCGGAGCTGGTAGAACAGTTCCTCAGCAACCTCTGCTCCAGCACATGAGGGGCTCTTTTTCAGCACAGCCAGGTGATGTGTATGGAAATAGTGGAACGCACACCATGCGTCCTCCGGCTAGTTCCTACAATGTGTATGATGGTGAGAATGCCAGAGCACATTATCCACCTGAACCTTCTCATTATGCTCAAGCTGGATATCCTCCAACTAGTGCATCCCTTCACAACCCTGCATCACATAATCTTATGGTCCCGAGTCCTAGCCAGTCACAATTTATTCGTAGCCATCCCTACAATGATTTGATCGAGAAATTTGTGAGCATGGGATTTAGAGGCAATCATGTAGCAAGCATTATCCAGAGGATGGAGGAAACTCAGCAACCTATAGATTTTAACTCTGTACATGACCGGTTGAATGTGCATAATCCCCAGAGGGGATGGTCAGGGTAA 1599 0.4603 MASLPSSRSNGGSNGFDLGSGDILCSYEEDNTNHDSSDGTHIDPAKGSHASRMARTSVVPATAYSSSEDSLSQDVIAIVEKSMKTHADNLMRFLEGLSTRLSQLELYCYNLDKSIGAMQSDLTCDHEETDSKLKSLDKHLQEVHRSVLILRDKQELAETRKELAKLKHVRKESSSSSHLQSNEERSSPSSMDPKRIDNVSDTQNQELALALPHQVAPRQQPVASSYQVPAPNVSQATQRPHYYLMPTHLPNPQAVTQLPQNQYLPSDPQYRIPLSTSSSQVIQSPPVQQFSQYQQLQYQQQQWAPQLPPQQVQVPPPQPPSAVSQVRPPSTNVYTPYATSQATNPLPTETLPNSVPMQMPYSGIPPQGSSSGGGGSDAMPYGYSGAGRTVPQQPLLQHMRGSFSAQPGDVYGNSGTHTMRPPASSYNVYDGENARAHYPPEPSHYAQAGYPPTSASLHNPASHNLMVPSPSQSQFIRSHPYNDLIEKFVSMGFRGNHVASIIQRMEETQQPIDFNSVHDRLNVHNPQRGWSG* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1730 532 MobiDBLite consensus disorder prediction 179 197 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 301 331 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 218 234 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 437 463 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 28 42 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 165 197 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 309 324 - -
Gso12g1730 532 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 530 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 214 234 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 449 463 - -
Gso12g1730 532 Pfam UBA-like domain (DUF1421) 481 525 IPR010820 -
Gso12g1730 532 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 530 - -
Gso12g1730 532 Coils Coil 149 169 - -
Gso12g1730 532 MobiDBLite consensus disorder prediction 27 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1730 Gso-Chr12 40914791 40918726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1730 75 167 Trihelix Transcription Factor Family AT5G14540 36.559 1.26e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1730 - - gmx:100527106 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1730 12 40914791 40918726 Gso11g3133 11 47216749 47220534 GST