Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1692 ATGGCTCAAGAAATGAAAGAGCCTGCAGTGAACATCATAGAGCAATCTCAAGTTGCTCCCCCACAAGATTCCCTTCATTCAACCATTCTCCCCCTCACTTTTCTGGACATTCCATGGTTCCTAACCCGCCACGCCAGACGCATCTTCTTCTATGAGTTTCCCTTTCCTACCACCCACTTCCTCGAAACAGCACTTCCCACCCTGAAACACTCTCTTTCCCTCACTCTCCAACATTTCTTCCCCTTTGCCTCTAATCTCATCCTCCCTCCACGTCTCCATGTCCCTTACATCCGTTACCTTAACGGCGACTCTGTCTCGTTCACTGTCTCAGAGTTCAGTCCTGCAAACTTCACGCTTCTCACGTCAAATTCCCCTCAAGATGTCAATGACTGGCAACCCCTTGCTCCGGCATTTCCCTCGCCACGCACTACACACGACGGCACGTGCGAGTTCCCCCTCATGGCCATTCAGGTAACGGTGATACCTAACTCTGGATTCAGCATATGTGTTATCTTCAACCACGTTGCAGGAGATGGGAGAACCCTTCATCATTTCATGAAGTTTTGGGCCTCAGTTTGCAAGGCCAAAGGGGATTTGAATTTCCCTGGCTCTGTGCCTCTACCCTTATATGATAGGGACATAGTGAAAGACCCCAAAGGGCTCATGCACGTTTACGTGCAAGAGATGAGAAATTCAGCGTTGCAAAATAAGCATTTCGGAGGGTTTTTACGTGGTGTTTACGCTGACAAGGTACGTGCCGCTTTTATGTTTAGTAGAGAACAAGCTGAGAAACTAAAGAAATGGGTCTCTCTTAAATGTAACAGTTCAGGGACTTTACATATATCAACCTTTGTAGTGACATGTTCTTTGATATGGGTGTGTATGCTCAAATCAGAACAAAAGGAAGAGGAAGGTAATAACTATGTTACAAAAGGTTACTTTGATGAACCATGCAACATTGGATTTTCCGCAGACTGTCATAACCATCCTCAGTTTTCATTACCTTCAAACTACTTTGGGAACTGTTTGATCCCTCTCCTCACAACCCTAAAGAGGGGTGAGTTGGTGGGACAAAATGGGATTGTTGCAGCTGCAAATGCCATTGAAAGGAAGATTAGAGATTTCAAGAGTGATGCTTTGAGATGGGCTGAAACAACGATGTCAGATATTAGAGGCTTAGGGAAATGTGGTCAATCTCTTGTGGTGATTGTTGGCTCGCCGAAACTTACTGCGTACAACACTGACTTTGGATGGGGGAAGCCCATAAAGTCAGAAGTGGTGAATCTTGATTCTGTGCGAACAGTTTCTCTCACTGATTGTAGAGACCAAGAAGGTGGAATTCAGGTTGGAATAGTACTCGAGAGGATTCAAATGAACAATTTCACTAACATCTTGGAAGAACACCTTAGTCATATTGCAGTTCTTGACTAA 1431 0.45 MAQEMKEPAVNIIEQSQVAPPQDSLHSTILPLTFLDIPWFLTRHARRIFFYEFPFPTTHFLETALPTLKHSLSLTLQHFFPFASNLILPPRLHVPYIRYLNGDSVSFTVSEFSPANFTLLTSNSPQDVNDWQPLAPAFPSPRTTHDGTCEFPLMAIQVTVIPNSGFSICVIFNHVAGDGRTLHHFMKFWASVCKAKGDLNFPGSVPLPLYDRDIVKDPKGLMHVYVQEMRNSALQNKHFGGFLRGVYADKVRAAFMFSREQAEKLKKWVSLKCNSSGTLHISTFVVTCSLIWVCMLKSEQKEEEGNNYVTKGYFDEPCNIGFSADCHNHPQFSLPSNYFGNCLIPLLTTLKRGELVGQNGIVAAANAIERKIRDFKSDALRWAETTMSDIRGLGKCGQSLVVIVGSPKLTAYNTDFGWGKPIKSEVVNLDSVRTVSLTDCRDQEGGIQVGIVLERIQMNNFTNILEEHLSHIAVLD* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1692 476 Gene3D - 247 473 IPR023213 -
Gso12g1692 476 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 473 - -
Gso12g1692 476 Gene3D - 9 240 IPR023213 -
Gso12g1692 476 PANTHER - 10 473 - -
Gso12g1692 476 Pfam Transferase family 10 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1692 Gso-Chr12 40558614 40560217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1692 35 467 Monolignol Biosynthesis Gene Families AT5G48930 23.673 3.90e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1692 - - gmx:102667695 929.472