Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1691 ATGGCAGTGCCAAGAGCACACAAGCTTGTTGAGAAATCTGAGGTTGCTCCAGCAACAACGAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTGCCTCTAGCAGGTCCTATTTATGTGAGACGCCAATTCTTCTATCACTTTGCACACCCCACACACCATTTCTGTCAAACCACACTCCCCACTCTCAAACACTCACTCTCTCTCACTCTCTCTCACTTTTTTCCTCTCGCTGGCAACCTCCTCTGTCCTTCACCACCCCACAAACCCTTCATTCGCAACACCAATGATGACACTGTCACCTTAACAGTCATTGAATCCGAAGCTGATTTCAAGCTCCTCTCATCCAACCACCCCAAGAGTCTCAAAGAATTAGATCACTTGGTTCCAGAGTTGAGTTTCTCATTCTCAACCATGCATGATGACACGTTCATTTTCCCTATAATGGCATTGCAAGCCACGGTTTTCCCAAACCATGGCCTTTGCATCGCCATCACGTACTGTCATGCGATTGATGGTAAATGTTGCAGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGACTTTACTCTTTTGGAAAAGTCACCACCTTGCTTTGATAGGGAAGTGTTGAAGGACCCCAGAGGACTCGAGGCCATTTTCTTAAGACAGTATTTTGAAGAGAGAACAACTTGGAAGGGCAAACTCGGTGGAAGAAAAGATGATAGCGATGAAGACTTTGTTAAGGCAACTATTGTTTTTGGAAAAGATGATACTGAGGGCTTAAAAAGATGGGCACTGACTCAGTGGAAGAAAAACAACGAGTTCAACTCGCCCCAAAATCTGTCAAAGTTTGTGGTGACGTGTGCTTTTGTGTGGGCTAGTTTGGTTAAAACAAGATGCAGAAACTATGATGATGAAGAAGAAGATGTCAAAGAGGAGTACTTTCGTTTCGCTGCTGATTGCAGAGATCGCCTTGGGTACCCTATACCAGAAACTTACTTTGGAAACTGCTTAACGCTATGTTATGCAATACTTAAGAGAAAAGACCTCAAGGGAGAAAGTGGTTTTGTGAATGCGGCCAAGGTAATTGAAAAGTCAGTGAGTGATATGAAAATTGATCCTTTTAAAGATGCGGAACATTGGAGGGAGTTGTTTTTGAAGATGTTTGTGTTGGGAAGTGCACTGCTGGTTACAGGGTCACCCAAGCTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTGGAAATGGTACATCCCTTCAATTGTATGTCTCTGGCTGAAAGTGAAGATGAGGAAGGAGGACTCGAGGTTGGCTTGGTGTGTAGAAGTACAGAGTTTGAAGATTTAAATTCTGTCATTCAACAAGGACTTAAAACTTCAAAATCCTAA 1401 0.434 MAVPRAHKLVEKSEVAPATTRTTSSLPLSFLDLPLAGPIYVRRQFFYHFAHPTHHFCQTTLPTLKHSLSLTLSHFFPLAGNLLCPSPPHKPFIRNTNDDTVTLTVIESEADFKLLSSNHPKSLKELDHLVPELSFSFSTMHDDTFIFPIMALQATVFPNHGLCIAITYCHAIDGKCCSHFMKSWSSICRSGGVDFTLLEKSPPCFDREVLKDPRGLEAIFLRQYFEERTTWKGKLGGRKDDSDEDFVKATIVFGKDDTEGLKRWALTQWKKNNEFNSPQNLSKFVVTCAFVWASLVKTRCRNYDDEEEDVKEEYFRFAADCRDRLGYPIPETYFGNCLTLCYAILKRKDLKGESGFVNAAKVIEKSVSDMKIDPFKDAEHWRELFLKMFVLGSALLVTGSPKLTVYETDFGFGRPTKVEMVHPFNCMSLAESEDEEGGLEVGLVCRSTEFEDLNSVIQQGLKTSKS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1691 466 Pfam Transferase family 11 447 - -
Gso12g1691 466 Gene3D - 243 464 IPR023213 -
Gso12g1691 466 Gene3D - 7 234 IPR023213 -
Gso12g1691 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 466 - -
Gso12g1691 466 PANTHER - 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1691 Gso-Chr12 40551491 40553110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1691 11 447 Monolignol Biosynthesis Gene Families AT5G48930 24.070 7.29e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1691 - - gmx:100811986 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1691 12 40551491 40553110 Gso11g3178 11 47563787 47565414 GST