Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1690 ATGGTGGTTCTTAGAGAACACAAGCTTGTTGGAAAAATTCAGGTTGTTCCAGCAGTGAGAACAATCACCACTCTTCCCCTCACATTCCTTGATTTGCCTTTGGCAGGTCCTATTTATGTGAGACGCCAATTCTTCTATCAGTTCCCCCATTCCACACTCCATTTCTCTGAAACCACCCTTCCTTCTCTCAAAACCTCTCTCTCTAAAACCCTTCAACACTTCTTCCCTCTCGCTGGAAACCTCATTTGTCCTCCACCACCCCACAAACCCTTCATTCGCTGCACCGATGATGACTCTGTCACCTTAACCATCATCGAGTCCCAAGCAGATTTCAAAAATCTATCATCAAACCACCCCAAAAGCCTCAAAGACTTGGATCACTTGGTTCCCAAGTTAACATGCACATATACACACGATGACACGTTCATTTTCCCTTTGGTGGCATTGCAAGCCACGGTTTTCCCCAACCATGGCCTTTGCATCGCAATCACGTATTGCCACGTGATGGATGATAACTGTTGCAGCCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGACTTGACTCTTGTGGAGAAGTCAACGCCTTGCTTTGATAGGGAAGTGTTGAAGGACCCCAAAGGACTCGAAGCTATCTTCTTAAGAGATTATTTTGAAGAGAGGTCAAGTTGGAAGGTTGGTAAAACTTCTGAGATTTCCAATGAAAATACTGAAGATTATGTCAAAGCAACGATTGTTTTTGGAAGAGAAGACATTGAGGGGCTAAGAAGATGGGTGCTGAATCAGTGGAAGAAGAGTGAGGAATTCAACACGCCACAATATATGTCAAAATTTGTGGTGGCATGTGCTTTTGTGTGGGCTAGTTTGGATAAAACAAGATGCATAAATGATGAAGAAGAAAATGTGAAAGAGAAGTATTTTGGTTTCACTGCTGATTGCAGGGATCGCCTTGGGTATCCTATACCAGAAACATACTTTGGAAACTGCTTAACTCTATGTTATGCAATGCTTAAGAGAAATGACCTAAAGGGAGAGAATGGTTTTGTAAATGCGGCCAAGGTCATTGAAAGAGCTGTGGCTGATATGAAAATTGAACCCTTGAAAGATGTAGAACACTGGAGGGAGTCGTTTATGAAGATGTACGTGTTGGAAAGTACCTTGATGGTTACAGGGTCACCCAAGTTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTGGAAATGGTACATCTCTTCAAGTGTATTTCTCTAGCTGAAAGTGGAGATGAGGAAGGAGGACTTGAGGTTGGTTTGGTGTGTAGAAGTACAGAGTTTGAAGATTTATTTTCTGTCATTGAACAAGGACTAAAAGCTTCAAAATCCTAA 1389 0.4226 MVVLREHKLVGKIQVVPAVRTITTLPLTFLDLPLAGPIYVRRQFFYQFPHSTLHFSETTLPSLKTSLSKTLQHFFPLAGNLICPPPPHKPFIRCTDDDSVTLTIIESQADFKNLSSNHPKSLKDLDHLVPKLTCTYTHDDTFIFPLVALQATVFPNHGLCIAITYCHVMDDNCCSHFMKSWSSICRSGGVDLTLVEKSTPCFDREVLKDPKGLEAIFLRDYFEERSSWKVGKTSEISNENTEDYVKATIVFGREDIEGLRRWVLNQWKKSEEFNTPQYMSKFVVACAFVWASLDKTRCINDEEENVKEKYFGFTADCRDRLGYPIPETYFGNCLTLCYAMLKRNDLKGENGFVNAAKVIERAVADMKIEPLKDVEHWRESFMKMYVLESTLMVTGSPKFTVYETDFGFGRPTKVEMVHLFKCISLAESGDEEGGLEVGLVCRSTEFEDLFSVIEQGLKASKS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1690 462 Pfam Transferase family 15 437 - -
Gso12g1690 462 Gene3D - 241 459 IPR023213 -
Gso12g1690 462 Gene3D - 8 233 IPR023213 -
Gso12g1690 462 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 462 - -
Gso12g1690 462 PANTHER - 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1690 Gso-Chr12 40541208 40542870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1690 19 411 Monolignol Biosynthesis Gene Families AT5G48930 24.029 1.25e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1690 - - gmx:100811456 924.465