Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1671 ATGAGAACTGATGAGGTTCTGTTCTCCTTTTCTCTTTTTTCTTTGGTGTTATGCTTCCAACTCTGTTCCACTGGAGATACTTTGAAGGCTGGCCAGAAGATAACTCTGAACTCATTGGAGAACCTTGTTTCATCTAACCGCACATTTGAGCTTGGTTTCTTTCCTTTAAGTGGTAGCAGCAGTGTTGTAAAAAGCTACTACTTGGGGATATGGTATCACGGGTTGGAACCACAAACAGTGGTATGGGTTGCAAATAGAGTCAAGCCTGTTTCAGACTCTAGTGGTGTTTTGCGAATTGCAGAGGATGGAAATCTGGTGGTAGAAGGTGCGTCAAAAAGGCATTGGTCCTCTGTAATTGAAGCACCCTCGTCCACAAACAGAACACTGAAGCTCCTAGAATCAGGGAACCTAGTACTAATGGACGATAACTCGGGAAACAGTAATTACCTGTGGCAGAGTTTCAAGAACCCAACAGACACGTTTCTTCCTGGCATGAAAATGGATGCAAGTTTAGCATTGACTTCATGGAGAAACTCCACTGCCCCGGCACCTGGTAACTTCACCTTTACGCTGGCTCCAGAGGACGAGAGGGGAAGCTTCGCAGTGCAAAAGCTATCACAAATCTACTGGGACCTTGACGAACTCGACAGAGATGTTAATTCCCAAGTAGTATCTAATTTGTTGGGCAACACCACCACCCGGGGTACTAGGTCGCACAATTTTTCAAACAAAACCATCTATACATCGAAGCCTTACAATTACAAGAAATCGAGGCTGCTAATGAATTCCAGTGGGGAGTTACAATTTCTCAAGTGGGATGAGGATGAAGGGCAATGGGAAAAGCGCTGGTGGGGGCCAGCTGACGAGTGCGACATTCATGATTCTTGCGGGAGCTTTGGCATATGTAACAGAAATAACCATATTGGCTGCAAATGTTTACCAGGATTCGTTCCCATTCCTGAGGGAGAGCTCCAAGGACATGGGTGTGTGAGAAAATCAACATCGTGTATCAACACCGACGTCACATTCCTCAACTTAACCAACATAAAAGTACGAAACCCAGACAATGAAATTTTTACAGAAACAGAAGCAGAATGCCAGTCCTTTTGCATTAGCAAGTGTCCCCTTTGCCAGGCATATTCATATCATACGTCTACATACGGTGATCGCAGTCCCTTTACATGCAACATCTGGACACAGAATTTATCTTCTCTTGTAGAGGAGTACGATCGTGGCCGTGATCTTTCTATCCTCGTTAAGAGATCAGATATAGCACCAACTGCAAAAACGTGTGAACCTTGCGGAACATATGAGATTCCTTATCCACTAAGCACTGGGCCAAACTGTGGAGATCCCATGTACAACAAGTTCAATTGTACCAAATCGACAGGCCACGTTAACTTCATGATGCCCAAAGGAATATCATACCAGGTTACTGGGATCGAAGAAGATACCAGAACGTTTTTCATTCATACGGATGCTTCATATTCCTGTAGTTCCAGAAGAGATCAAAATAACACACCTAATTTGCCATTTAATGTAGTTGATTGCATACAAGATTTTGGAATAGTTAAATTCAGTTGGCAACCAGCACCAGAACCTCCCTGTAATAGGCCTATGGACTGCATGAATTGGCCCCATTCAACATGCAGAGAAACAAGTGAAGGAGGAACCAGGTGCCATTGTGATTTAAAATATAGGTGGAACAACTCAATCATGAGTTGCACCCAAGAGCCACCGAGCAATCGTTCATACAAACGACTGGCATTGATTCTTACAATAATTTTAATAAGCATTATTACTCTGGCATGCATAATAGTACTTGCAATTGTGCGGCGAAAGAAAAATGCCCCTAAGCCTGATCGGGCAAGCACCCAAATTCAGGAGAGCTTGTATGAGAGTGAAAGACAAGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAAGGACATTGAAGGAATTGAAGTACCCTGTTATACTTATGCAAGCATTCTAGCAGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGAAGAGGAGGTTATGGACCTGTTTATAAGGGAACGTTTCCTGGAGGTCAAGACATAGCTGTAAAGAGGCTTTCAAGTGTTTCCACTCAAGGCTTAGAGGAATTCAAGAATGAGGTTATTTTGATTGCAAAACTTCAGCATCGGAACCTTGTTAGACTCAGGGGCTATTGCATTGAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCCGACACGAACTTCACTCCTGGATTGGCCAATACGATTTGAGATAATCGTAGGCATTGCGCGAGGCATGTTGTATCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACCTGAAAACCAGCAACATACTTCTGGATGAGGAGATGAATCCAAAGATATCAGACTTTGGTCTTGCCAAAATATTTGGGGGAAAAGAAACTGAAGCATGTACAGGGAGAGTAATGGGAACCTTTGGATACATGGCTCCAGAGTATGCCTTGGACGGATTCTTTTCAACCAAATCCGACGTTTTCAGCTTTGGAGTAGTCCTTCTAGAGATTCTTAGTGGAAAAAAGAACACTGGATTCTATCAGTCCAAGCAAATTTCTAGCCTTTTGGGTCATGCATGGAAGTTATGGACAGAGAATAAGCTACTGGATTTAATGGACCCATCTCTTTGTGAAACATGCAACGAAAATGAATTCATTAAGTGTGCAGTCATTGGACTCTTATGCGTACAAGATGAACCAAGTGATCGACCCACTATGTCAAATGTTTTGTTCATGCTCGACATAGAGGCAGCAAGCATGCCAATTCCCACGCAGCCAACCTTTTTTGTGAAAAAGCATCTTTCTAGCTCAGCTTCCTCTTCGAGCAAACCAGATATAGGTCAGTTTGAGAGCAGTTATCAAGAAGGTCGATACGCCGGTTGTTCAACCTCAAGAGATCAAAATAACACACCTAATTTTCCATTTAATGTAGTTGATTGCATACAAGATTTTGGAATAGTTAGATTCAGTTGGCAACCAGCACCAGAACCTCCCTGTAATAGGCCTATGGACTGCATGAATTGGCCCCATTCAACATGCAGAGAAACCAGGTGCTATTGTGATTTAAAATATAGGTGGAACAACTCTATCATGAGTTGCACCGAAGAAGAGCCGTCAAGAGAGCATTTAACCCACCGACTGGCATTGATTCTTACAGTAATTCTTGGTTCCATGGCTATTCTGGCATGCATAACAGCATTTGTGCTTGTCCGGAGAAAGAAAAAAGCTCATAAGCTTGATCGGGCAAGCACCCAAATTCAGGAAAGTTTGTATGAGAGCGAAAAACGTGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAAAGATATTGAAGGAATTGAAGTTCCCTGTTATACTTTTGCAAGCATTCTAGCAGCCACAGATAATTTCACCGATTCTAACAAGCTTGGAAGAGGTGGTTATGGGCCTGTTTATAAGGGAACGTTTCCTGGAGGTCAAGACATAGCTGTAAAGAGGCTTTCAAGTGTTTCCACTCAAGGCTTAGAGGAATTCAAGAATGAGGTTATTTTGATTGCAAAACTTCAGCATCGGAACCTTGTTAGACTCAGGGGCTATTGCATTAAAGGAGATGAAAAAATCCTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGACACGAACTTTACTCCTGGATTGGCCAATACGATTTGAGATAATCGTAGGCATTGCGGGAGGCATGTTGTATCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACCTGAAAACCAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGTCTTGCCAAAATAGTTGGGGGAAAAGAAACGGAAGCCAGTACAGAGAGAGTAGTGGGAACCTATGGATATATGGCTCCAGAGTATGCTTTGGATGGACTTTTTTCATTCAAATCCGATGTTTTCAGCTTTGGAGTAGTCCTACTAGAGATTCTTAGTGGGAAAAGAAACACGGGATTCTATCAGTCCAAACAAATTTCTAGCCTTTTGGGTCATGCATGGAAGTTATGGACAGAGAATAAGCTACTGGACTTAATGGACCCATCTCTTGGTGAAACATGCAACGAAAATCAATTTATTAAGTGTGCACTCATTGGGCTATTATGCATACAAGATGAACCAGGTGATCAACCTACTATGTCAAATGTTTTGTCAATGCTTGACATAGAGGCAGTAACCAAGCCAATTCCCACGCCACCAACCTTTTTTGTGAACAAGCGTCATTCTAGCTCAGCTTCCTCTTCTAGCAAACCAGAAACAAGTCTGCAATTTGACAGCAGTTATCAAGAAGGTCGATAG 4434 0.4211 MRTDEVLFSFSLFSLVLCFQLCSTGDTLKAGQKITLNSLENLVSSNRTFELGFFPLSGSSSVVKSYYLGIWYHGLEPQTVVWVANRVKPVSDSSGVLRIAEDGNLVVEGASKRHWSSVIEAPSSTNRTLKLLESGNLVLMDDNSGNSNYLWQSFKNPTDTFLPGMKMDASLALTSWRNSTAPAPGNFTFTLAPEDERGSFAVQKLSQIYWDLDELDRDVNSQVVSNLLGNTTTRGTRSHNFSNKTIYTSKPYNYKKSRLLMNSSGELQFLKWDEDEGQWEKRWWGPADECDIHDSCGSFGICNRNNHIGCKCLPGFVPIPEGELQGHGCVRKSTSCINTDVTFLNLTNIKVRNPDNEIFTETEAECQSFCISKCPLCQAYSYHTSTYGDRSPFTCNIWTQNLSSLVEEYDRGRDLSILVKRSDIAPTAKTCEPCGTYEIPYPLSTGPNCGDPMYNKFNCTKSTGHVNFMMPKGISYQVTGIEEDTRTFFIHTDASYSCSSRRDQNNTPNLPFNVVDCIQDFGIVKFSWQPAPEPPCNRPMDCMNWPHSTCRETSEGGTRCHCDLKYRWNNSIMSCTQEPPSNRSYKRLALILTIILISIITLACIIVLAIVRRKKNAPKPDRASTQIQESLYESERQVKGLIGLGSLEEKDIEGIEVPCYTYASILAATDNFSDSNKLGRGGYGPVYKGTFPGGQDIAVKRLSSVSTQGLEEFKNEVILIAKLQHRNLVRLRGYCIEGDEKILLYEYMPNKSLDSFIFDPTRTSLLDWPIRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEACTGRVMGTFGYMAPEYALDGFFSTKSDVFSFGVVLLEILSGKKNTGFYQSKQISSLLGHAWKLWTENKLLDLMDPSLCETCNENEFIKCAVIGLLCVQDEPSDRPTMSNVLFMLDIEAASMPIPTQPTFFVKKHLSSSASSSSKPDIGQFESSYQEGRYAGCSTSRDQNNTPNFPFNVVDCIQDFGIVRFSWQPAPEPPCNRPMDCMNWPHSTCRETRCYCDLKYRWNNSIMSCTEEEPSREHLTHRLALILTVILGSMAILACITAFVLVRRKKKAHKLDRASTQIQESLYESEKRVKGLIGLGSLEEKDIEGIEVPCYTFASILAATDNFTDSNKLGRGGYGPVYKGTFPGGQDIAVKRLSSVSTQGLEEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPIRFEIIVGIAGGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIVGGKETEASTERVVGTYGYMAPEYALDGLFSFKSDVFSFGVVLLEILSGKRNTGFYQSKQISSLLGHAWKLWTENKLLDLMDPSLGETCNENQFIKCALIGLLCIQDEPGDQPTMSNVLSMLDIEAVTKPIPTPPTFFVNKRHSSSASSSSKPETSLQFDSSYQEGR* 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1671 1477 Pfam D-mannose binding lectin 79 170 IPR001480 -
Gso12g1671 1477 MobiDBLite consensus disorder prediction 1448 1477 - -
Gso12g1671 1477 SUPERFAMILY Protein kinase-like (PK-like) 655 943 IPR011009 -
Gso12g1671 1477 ProSiteProfiles Protein kinase domain profile. 1161 1448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1671 1477 Gene3D Transferase(Phosphotransferase) domain 1 748 950 - -
Gso12g1671 1477 Gene3D Transferase(Phosphotransferase) domain 1 1237 1439 - -
Gso12g1671 1477 CDD STKc_IRAK 678 944 - -
Gso12g1671 1477 Pfam S-locus glycoprotein domain 246 318 IPR000858 GO:0048544
Gso12g1671 1477 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Gso12g1671 1477 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 180 IPR036426 -
Gso12g1671 1477 Pfam Protein tyrosine and serine/threonine kinase 675 940 IPR001245 GO:0004672|GO:0006468
Gso12g1671 1477 Pfam Protein tyrosine and serine/threonine kinase 1164 1379 IPR001245 GO:0004672|GO:0006468
Gso12g1671 1477 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 985 - -
Gso12g1671 1477 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1053 1475 - -
Gso12g1671 1477 SMART blect_4 33 157 IPR001480 -
Gso12g1671 1477 ProSiteProfiles Protein kinase domain profile. 672 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1671 1477 ProSiteProfiles PAN/Apple domain profile. 336 422 IPR003609 -
Gso12g1671 1477 Gene3D - 20 155 IPR036426 -
Gso12g1671 1477 SMART serkin_6 1161 1405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1671 1477 SMART serkin_6 672 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1671 1477 CDD STKc_IRAK 1167 1433 - -
Gso12g1671 1477 SUPERFAMILY Protein kinase-like (PK-like) 1146 1466 IPR011009 -
Gso12g1671 1477 CDD B_lectin 35 157 IPR001480 -
Gso12g1671 1477 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1053 1475 - -
Gso12g1671 1477 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 985 - -
Gso12g1671 1477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1282 1294 IPR008271 GO:0004672|GO:0006468
Gso12g1671 1477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Gso12g1671 1477 Gene3D Phosphorylase Kinase; domain 1 1135 1236 - -
Gso12g1671 1477 Gene3D Phosphorylase Kinase; domain 1 646 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1671 Gso-Chr12 40315441 40323266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1671 662 973 Receptor kinase-like Gene Family AT4G23140 56.966 1.66e-121 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso12g1671 PK_Tyr_Ser-Thr 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1671 - - gsj:114379027 2984.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0850 12 9294865 9300317 Gso12g1671 12 40315441 40323266 PCT