Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1663 ATGGGTGATGGAGGCGTCGCGTGCATGCATTTGCAGTATATTATGGAGAGGTTGCCCAGTTCTGAGAAGACTGTTTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGCGCAAGTTTGCTGGCAACGAGAGGAGGAAGATGAAACCGAGGAAGAGCGAATTGGGGTTGGACAGAGTGAGCAAGAGGAGCAGCAGCAGCAACGATGTTGAGAATGGTGGCGAAGTGGAGAAGCAGCAGCATGAGAAGGTGCAGAAGGAGGAAGTGGAGGAGGGCGAATTGGGCACTTTGAAGTGGCCAAGAGCTGACCTGGAGAATGGGGAGTTTGTGCCGGAGATGCCGCCGCCACCGAGGAGAGGCGAGGTTGAGAACGGGGAGATTGTGAGTGAGAAATGGAAAGGAAGGGAGCTAGAGAAGGGGGAGATTGGTTCTGGGAAATGGAGGAAAGAGGATGTGGAAAGAGGGGAGATAGTGAGTGAGAAGGGTGGTAGGAAAGGGGAAGCTGATAGAGGTGAATACGGGTCGTGGAGAGGAGGAAAGGATGAAATTGAGAAGGGAGAGTTCATTCCAGATAGATGGTATAAGGGAGATTATGATAACAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGGGGAAAATTGAACGTGAACGTGAACGTGAACGTGAAAATACACCTTCTTCTGGGAGATATACCGGGGATGACTTTTTTAGAAAGAAGGAGTTAAATAGAAGTGGGACTCAGCATGTTAAAAGTTCTCCCAGGTGGGAGGGTGGTGGACAACAGCGGAATGTAAGGATCAGTTCAAAGATTGTGGATGACGAGAAGAATGTACACAGCAATGGTAAGGACCATACACGAGATTACTCTTCTGGGAGTCGCTTGAAGAGGCTTGGCAATGATACTGACAGCTATGAGCGGAAGCAATCTGCAGATTATGCCGGGTTGAAAAGCAGAAGGCTTTCTGATGATAGCTGTCGCCAAGTTTATTCGGAGAACTATTCTCGTCATTCTCCACGCTCTGTGGAACGGTCTTACAAAAATAATAATGCCACAAAATTATCAGCAGACAAGTATTCTTTGTCCACCAGACCGGCTTATGACAGGCATGGACGCAGCCCTGGTCATTCTGAGCGGTCCCCACGAGACCGAGGTAGGTATTATGATCATAGGGATCGCACTCCAGTGCGTCGATCTCCCTGTGGTCGTGACAGATCTCCGTATAACCGGGAGAAATCCCCCCATGGGCGGGAGAAGTCCCCATATATGAGGAACTGGGATAGAAGTCGTCAGCATGATCATAAATTGAGAAGTCCAATGCGTGCTGAGCAGTCGCCACCAGATCGAAGTTCGCATCATGATCGCAGGGATTGTACCCCAAATTTGGCAGAAGCATCTCCCCTTCAACGAGCGAGGAAAGACTGTCGACAGGAATCAAGTAGTAAAACCTTATCAAGTGAAAAACATGATTCCCAAAATAGTTGCAAGGATCGTGAAGATAAGCAGATTCAAAGGGAGTCAAATTGTTCAAGTACAGAATCTCAAAATGAAAAAAGTGTGCAAGTTACCATTAAGTCTGTTGAGAAAGACATCTGCAGTGAACCTCTAAAGGAACAGCAGAGTTGCAGCCCAACTGTCAGCCACAAAGAATCTCCTCACTCCGAGCCACCTCCTGAGGAGCTGCCTTCGATGGAGGAAGATATGGACATTTGTGATACCCCTCCACATGCCCCTGTGATGACAGATTTGTCGTCAGGGAAATGGTATTACCTTGACTATGGTGGTGTAGAAAATGGACCTGCTAAATTGTGTGACATCAAGGTCCTTGTTGATGAAGGTGTACTAATGTCTGATCACTTCATCAAGCACTTAGATAGTGACAGGTGGTTAACATTTGAAAATGCTGCCTCACCTTTGGCACGTCAGAGCTTTCCATCAATTGTGTCTGATACCATAACTCAACTGGTAAATCCTCCAGAAGCTCCTGGTAATATCTTGTCTGATGGAGCAGATATTCTTCAATCTGCTCATGATAATCACCAGGAAATGCAGCCACCAGTTTGCCCTAATGACAGTGTGTTTACATCTGAACTTTTGGAGGACCTCCACATAGATGAAAGAGTTAGAAATCTGTTAGAGGGTTATGATGTCACTCCTGGGATGGAACTTGAGGCAATAAAAGAAGCACTGCAAATGAATTTTGAAAATGCAAAAGGGGAGGGATTGGAAGACTATGAAGGTTTTCTTTGGAGTGTTTCCTGCCTTAGGGAAGATTGTGATTCAAGTGCTGATTTAGCATCAAGAGATTCTGAATCTCAGTCAAGTATGACCTGTGATAAGGATAATGGACTTGCCTTTGGTATTTCTAGTGACTGGTTTTCCACCCATTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGATGATGCCCAAGATAGATATTCTAGAAAGAAACTTGTCCTAAATAATGGTTTTCCATTATGTCAAATGGTAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAGGAGGCTTGATCTTCCTCTGTGGGCTTTCTGTGCTGATGAGCGGGATGATTGCAGTGTTGCTAGCAAATCAGTTCAAAGTAAGCCTGCTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCGGTGGTCAGGATAAATGCATGTGTAGTTAAGGATCAGGGATCATTGGTCTCTGAGTCACGCCACAAGACTCGGGTCAAGGAAAGACATCATTCAAGGTCAACTCGGCCCTTCTCTTCAACCAGTGATAGCAAGAGATCATCAACTGAACAAGATTCTCTGTCAAAAGCTGTTAGTGATCAAGGTTCTTACCAGATCGTGGAATTCATTAACACCCCTAAAGATCATCTCTGTACTATCCGTGAGTTGCAATTACATTTGGGTGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGGGGCCCCTCATCATTTTCAGAGTTACAGTATTTAGTAGATCAAGGTATCATAAAAAAACATAGTAGTGTGTTCAGGAAAAGTGATAAACTATGGGTTCCTATTACCTCTGCAACAGGAACTTCTGATGGCAGTCTCAGGAGCCAGCAAGAAAGCAGTTTGATATCTGGTGCATGCTCTGGTTTTCCATCAAAGCAAACTCAAGTTGTTTCATTTGGCGAAACGTACACAAATTCAACTTTATTTAACTGCTTACATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAACTGGTAATGAAATCATATAAAAGCCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAGGAAATTGAAAAACAAATATATTGGAAATCAGAAGGCGATGCACATGCTGCCAAAAGAGCCCGGATGCTGGTTGATGATAGTGAAGATGAAATTGATTTGGAAGATGATGATGTTAATATCGAGAAGGATGAATCCACTTTTGAAGATCTATGTGGTGATGCTACTTTCCCTGAAGAAGAAATTGGTATTACTGATTCTGATGTGGGAAGCTGGGGAAATTTGGAAGGTCGAGTGTTAGCACGGATCTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCAATGACTTGCAAGCGCTGGAGAGCTGCTGTAAGGTTTTATAAAGAAGTGTCAATACAGGTCAATTTGTTATCCTTAGGTCATTCCTGCACTGATACCATGTTGTGGAACATTTTGAATGCTTACGAGAAAGACAAGATCAATTCTATCATTCTAAGGGGTTGTGTCAATATTACGGCTGGCATGCTTGAGAAAATTCTTCTTTCATTTCCTTGTTTATTTACAATAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCCAATGTGAAATGGATCAAGAGCCGAAGTTTGCACTTGACTAAAATTGCAGAGGAGTCTCATAAAATTAGAAGCCTTAAACATATTACAGAGCTAACCTCTTTTGTTTCCAAATCCAGCAGTTTAGGTATAGATGATTTTGGTCAATTGAAGGATTACTTTGATAGTGTGGATAAGAGAGATACCAAGCAGTTATTCCGTCAAAACTTGTACAAGCGGTCAAAACTATACGATGCTAGAAAGTCCTCCTCCATTCTATCTAGGGATGCTCGTACAAGACGTTGGGCAATCAAGAAATCTGAAAGTGGCTATAAGAGGATGGAGGAATTCCTTGCTTTAAGACTAAGGGAAATTATGAAGACAAATTCCTGCGACTTTTTTGTGTCCAAGGTTGCAGAAATTGAGGCTAAAATGAATAGTGGTTATTACAGTAGCCGTGGGTTGAATTCTGTGAAAGAGGACATAAGTAGAATGTGCCGTGATGCAATAAAAGTGAAGAATCGGGGTGATGCTAGTGACATGAACCATATCATCACATTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAGATCTGTGCACGATAGAAATGAACTACTGAAATTATGGGACAATGACTTGCCTGCAGGGTCCTGCTCTACTTTCTCAAAGTATAAGAAGAATAGATTGGTGAATGAAAGGAAGTATAGGAGCAATGGAACTCATGGTGGTTTGGATAATGTGGAATATACCTCTGATAGAGAAATTAGGAGGCGCTTATTAAAGTTGAACAAGAAATCTATGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATAAGTCTTATGAAGATGGGAAGAGTGACAGTGATACTACAACCTCTGACTCTGAAAGTGACCGAGAAGTACATTCAGAAAGTCTAAGTAGGGAGTCAAGAGGGGATGGATACTTTACGTCTGAGGAAGAGTTGGGTTTTATAACTGATGATCGAGAGTGGGGTGCTCGCATGACAAAAGCAAGTCTGGTTCCTCCAGTTACTAGAAAATATGAAGTCATTGACCAATATTGCATTGTAGCTGATGAGGAGGATGTGCGAAGGAAGATGAGGGTTTCATTACCTGATGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGACGAGTCAGATATGGAACTTCCTGAAGTAAAAGATTACAAACCTAGAAAGCAGCTAGGAAATGAGGTTATCGAGCAAGAAGTTTATGGAATTGATCCTTATACGCACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTTTGCAGGAGAAGCATTTGTTTATAGAAGACACACTCCTTCGAACATTGAATAAGCAAGTTAGGAATTTTACTGGAGCTGGAAGTACTCCAATGAGCTACCCGTTGCGGTCTGTTATTGAAGATATTAAAAAGTTCGCTGAGGAGGATTGTGATGTGAGAATGGTTAAAATGTGTCAAGGTATTCTAAAGGCCATAGACAGTCGTCCAGATGACAAATATGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTGCTGAAGATGATTTTGTTGTGGAGTTTTTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGACGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACCTAGTTGTTGTTGATGCCATGCACATGGCTAATTATGCCAGTCGAATATGTCATTCTTGCCGACCTAATTGTGAAGCCAAGGTTACTGCAGTTGATGGTCAATATCAAATTGGTATTTATAGTCTTCGTGAAATTCAACATGGTGAGGAGATCACTTTCGACTATAATTCTGTAACAGAGAGCAAGGAGGAGTATGAAGCGTCAGTTTGTTTGTGTGGAAGCCAAGTATGCCGGGGGAGCTATCTGAATCTGACTGGTGAAGGAGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTCGATCGGCAATATTTGATGCTAGAAGCTTGTGAATTAAATTCCGTGTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGCTTATGCAGCTCGCCTTGTGAGATTCGTCAATTTTGAAAGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGATATAATTCTTGAAGTTGAAAGGAGTGATGCCGAGGTTCAGGCTGAGGGTGTATACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCACCACCTCCTCTTGAGAAACTCAGTCCCGAAGCAACTGTTTCCTTTCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGAGCTTCTTCAGTGCATAACTCCTCATGTTGAAGAAGGCATCTTGAATGATCTCAAGTTTAAAATTCATGCTCATGATCCTTCAAATTCTGGAGATATTCAAAAAGAGCTTCGAAAGTCTCTGTTATGGTTGAGGGATGAGGTCCGAAATCTTCCCTGTACATATAAATGTCGGCATGATGCTGCTGCTGACCTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGAATACGGAATTATCAAACCATTACATCACCACCTGTCTATATCAGTCCGCTTGACTTAGGTCCCAAGTACACTAACAAGTTGGGAGCAGAATTTCAGGAGTATCGAAAGATATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCATAACCAGAGTAATGCAGATCCAGATCGTAACCTGGCTAGAGCCAGCAGGGGTTGCTTGTCTTTACCAGACACCAGTTCCTTTTATGCCAAGGCTCAGAAGCCATCACGGCATTGTGTTTATGGTCCAAGGACCGTTAGATCTATGCTGGCTAGAATGGAGAGGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTTAATAACTCTCCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGATCGTTAA 7128 0.428 MGDGGVACMHLQYIMERLPSSEKTVCGGKSGNGFNSKLRKFAGNERRKMKPRKSELGLDRVSKRSSSSNDVENGGEVEKQQHEKVQKEEVEEGELGTLKWPRADLENGEFVPEMPPPPRRGEVENGEIVSEKWKGRELEKGEIGSGKWRKEDVERGEIVSEKGGRKGEADRGEYGSWRGGKDEIEKGEFIPDRWYKGDYDNSRIRRYHSGRDKGGKIERERERERENTPSSGRYTGDDFFRKKELNRSGTQHVKSSPRWEGGGQQRNVRISSKIVDDEKNVHSNGKDHTRDYSSGSRLKRLGNDTDSYERKQSADYAGLKSRRLSDDSCRQVYSENYSRHSPRSVERSYKNNNATKLSADKYSLSTRPAYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPHGREKSPYMRNWDRSRQHDHKLRSPMRAEQSPPDRSSHHDRRDCTPNLAEASPLQRARKDCRQESSSKTLSSEKHDSQNSCKDREDKQIQRESNCSSTESQNEKSVQVTIKSVEKDICSEPLKEQQSCSPTVSHKESPHSEPPPEELPSMEEDMDICDTPPHAPVMTDLSSGKWYYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTFENAASPLARQSFPSIVSDTITQLVNPPEAPGNILSDGADILQSAHDNHQEMQPPVCPNDSVFTSELLEDLHIDERVRNLLEGYDVTPGMELEAIKEALQMNFENAKGEGLEDYEGFLWSVSCLREDCDSSADLASRDSESQSSMTCDKDNGLAFGISSDWFSTHWSCKGGDWKRNDDAQDRYSRKKLVLNNGFPLCQMVKSGCEDPRWPQKDDLYFPSQSRRLDLPLWAFCADERDDCSVASKSVQSKPASVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRVKERHHSRSTRPFSSTSDSKRSSTEQDSLSKAVSDQGSYQIVEFINTPKDHLCTIRELQLHLGDWYYLDGSGRERGPSSFSELQYLVDQGIIKKHSSVFRKSDKLWVPITSATGTSDGSLRSQQESSLISGACSGFPSKQTQVVSFGETYTNSTLFNCLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQIYWKSEGDAHAAKRARMLVDDSEDEIDLEDDDVNIEKDESTFEDLCGDATFPEEEIGITDSDVGSWGNLEGRVLARIFHFLKSDLKSLVFASMTCKRWRAAVRFYKEVSIQVNLLSLGHSCTDTMLWNILNAYEKDKINSIILRGCVNITAGMLEKILLSFPCLFTIDIRGCNQFGELTLKFANVKWIKSRSLHLTKIAEESHKIRSLKHITELTSFVSKSSSLGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKSESGYKRMEEFLALRLREIMKTNSCDFFVSKVAEIEAKMNSGYYSSRGLNSVKEDISRMCRDAIKVKNRGDASDMNHIITLFIQLATRLEESSRSVHDRNELLKLWDNDLPAGSCSTFSKYKKNRLVNERKYRSNGTHGGLDNVEYTSDREIRRRLLKLNKKSMDSESETSDDDLDKSYEDGKSDSDTTTSDSESDREVHSESLSRESRGDGYFTSEEELGFITDDREWGARMTKASLVPPVTRKYEVIDQYCIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTDESDMELPEVKDYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDTLLRTLNKQVRNFTGAGSTPMSYPLRSVIEDIKKFAEEDCDVRMVKMCQGILKAIDSRPDDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSLREIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRQYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFVNFERTKLPEEILKHNLEEKRKYFSDIILEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLQCITPHVEEGILNDLKFKIHAHDPSNSGDIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIRNYQTITSPPVYISPLDLGPKYTNKLGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRNLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMERQPQRSWPKDRIWSFKSSPKFFGSPMLDAVVNNSPLDREMVHWLKHRPAIFQAMWDR* 2376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1663 2375 MobiDBLite consensus disorder prediction 538 566 - -
Gso12g1663 2375 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2374 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 472 509 - -
Gso12g1663 2375 CDD SET_SETD2-like 1819 1967 - -
Gso12g1663 2375 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2374 - -
Gso12g1663 2375 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1956 2375 IPR045606 -
Gso12g1663 2375 Gene3D SET domain 1793 1976 IPR046341 -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 1585 1620 - -
Gso12g1663 2375 ProSiteProfiles SET domain profile. 1806 1945 IPR001214 GO:0005515
Gso12g1663 2375 MobiDBLite consensus disorder prediction 250 270 - -
Gso12g1663 2375 Pfam SET domain 1890 1945 IPR001214 GO:0005515
Gso12g1663 2375 MobiDBLite consensus disorder prediction 539 553 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 201 249 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 366 463 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 347 362 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 932 952 - -
Gso12g1663 2375 SMART set_7 1811 1951 IPR001214 GO:0005515
Gso12g1663 2375 MobiDBLite consensus disorder prediction 75 99 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 271 329 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 914 952 - -
Gso12g1663 2375 SUPERFAMILY SET domain 1820 1968 IPR046341 -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 510 525 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 140 182 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 23 128 - -
Gso12g1663 2375 SUPERFAMILY F-box domain 1190 1231 IPR036047 GO:0005515
Gso12g1663 2375 MobiDBLite consensus disorder prediction 1571 1620 - -
Gso12g1663 2375 Gene3D - 1193 1233 - -
Gso12g1663 2375 MobiDBLite consensus disorder prediction 201 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1663 Gso-Chr12 40202990 40217531 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso12g1663 SET 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1663 K22748 - gmx:100804519 4690.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1663 12 40202990 40217531 Gso11g3198 11 47792369 47805047 GST