Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1656 ATGCTCTCCATCTTTCTCAATCTCTTAGTGTTCTCTCTTTCCTTCCAAGGAAGCAATTCTATTAGTCCCTTATTTCGTTTCTGTTTTAACCGCGAAAATTACACTGATCCTAGCCCTTATGCTACAAACTTAAACCAGTTGTTTGACCTGCTACACACCAAAGTGCCTCCTACTGGTTATGGATATGGTTCCATTGGCCAAGGCATGGACCAAGTGAACGGTCTAGCCTTGTGTCGCGGTGACGTCAACGCCACAAACTGCATGGCTTGTGTCAATGAAGCAACCAAAAAGCTTCAAGAGAGGTGCTCAAAGAAGAAGGGGGCAATAGTATGGTACGATTACTGCCTTCTCAAGTACTCAAATGAATACTTCTTTGGTGAAATTGATGAGAAGAACAAGTTCTATATGGTTAACATATACGACGTGGATGACCCCTCTACTTTCAGTGATAAAGTCAATGAGTTGTTAAGTGGTTTGTCTTATAATGCTTCTCAAACTCCCATGTTGTATGCCGTAGGGGAATTGCAACTCCAAGAGTCAAAAACGTTGTACGGTTTGGCTCAGTGTACAAGGGACCTCCTTGGCCCTGGTTGTAAGAAGTGTCTTGATGATGCTATTAGTGATCTTCCAAATTGTTGTGACGGAAAGCAAGGTGCACGGGTTGTGGGTGGGAGCTGCTATGTTAGATATGAACTATACCCTATTGTTGAGGACCCCTAG 720 0.4333 MLSIFLNLLVFSLSFQGSNSISPLFRFCFNRENYTDPSPYATNLNQLFDLLHTKVPPTGYGYGSIGQGMDQVNGLALCRGDVNATNCMACVNEATKKLQERCSKKKGAIVWYDYCLLKYSNEYFFGEIDEKNKFYMVNIYDVDDPSTFSDKVNELLSGLSYNASQTPMLYAVGELQLQESKTLYGLAQCTRDLLGPGCKKCLDDAISDLPNCCDGKQGARVVGGSCYVRYELYPIVEDP* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1656 239 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Gso12g1656 239 ProSiteProfiles Gnk2-homologous domain profile. 130 235 IPR002902 -
Gso12g1656 239 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 18 236 - -
Gso12g1656 239 Pfam Salt stress response/antifungal 28 121 IPR002902 -
Gso12g1656 239 Pfam Salt stress response/antifungal 143 233 IPR002902 -
Gso12g1656 239 Gene3D - 22 124 IPR038408 -
Gso12g1656 239 Gene3D - 131 234 IPR038408 -
Gso12g1656 239 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 18 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1656 Gso-Chr12 40165221 40166291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1656 34 238 Pollen Coat Proteome AT4G20670 37.383 1.01e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1656 - - pvu:PHAVU_005G112700g 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1656 12 40165221 40166291 Gso11g3206 11 47849210 47850111 GST