Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1650 ATGAAAATGGGAAGCAACTTCAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCATCTCATGCTCAACTTCAGCTTGGTTTTTATGCCAAGAGTTGCCCAAAAGCTGAGCAAATCATTTTGAAATTTGTTCATGAACATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCACTTCCATGACTGTTTTGTAAGGGGATGTGATGGATCGGTGCTTCTGAACTCAACAACCAATCAGGCTGAAAAGAATGCTCCTCCAAATCTCACAGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAGGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACCTTGGCTTCCAGAGATTCAATTGTAGCCACAGGTGGACCCTATTGGAAAGTTCCAACAGGTCGAAGGGATGGGGTCATCTCTAACTTGGTGGAAGCCAGAAATAACATTCCTGCTCCATTTGACAACATCACTACGCTACAGACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTGGTGCTCACACAATTGGTATCGCTCATTGCTCATCATTGTCAAACCGCTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCATCATTAGACAGTGAATATGCTGCAAATCTGAAAACCTTCAAGTGCAAGGACCTCAATAAGTTGAACACCACCAAAATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTGTTGACTAATTCAGTTACAAAGGCTCAAATCATTGAATTGCTTGAAGGGTCAGTTGAAAAATTCTTTGCTGAGTTTGCAACCTCCATAGAGAAAATGGGAAGAATTAAGGTGAAGACAGGGACAGAGGGAGAGATCAGAAAGCATTGTGCATTTGTTAATAGCTAA 981 0.4251 MKMGSNFRFLSLCLLALIASSHAQLQLGFYAKSCPKAEQIILKFVHEHIHNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLASRDSIVATGGPYWKVPTGRRDGVISNLVEARNNIPAPFDNITTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKTFKCKDLNKLNTTKIEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKAQIIELLEGSVEKFFAEFATSIEKMGRIKVKTGTEGEIRKHCAFVNS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1650 326 PANTHER PEROXIDASE 4 325 - -
Gso12g1650 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 Gene3D Peroxidase, domain 2 160 304 - -
Gso12g1650 326 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Gso12g1650 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 Gene3D - 28 325 - -
Gso12g1650 326 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gso12g1650 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Gso12g1650 326 PANTHER PEROXIDASE 25-RELATED 4 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1650 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1650 Gso-Chr12 40108890 40111145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1650 12 325 Peroxidase AT4G11290 69.620 2.09e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1650 K00430 - gmx:100803114 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1650 12 40108890 40111145 Gso11g3216 11 47917669 47919567 GST
Gso12g1650 12 40108890 40111145 Gso12g0831 12 8952776 8955287 PCT
Gso12g1650 12 40108890 40111145 Gso6g2488 6 46641863 46644522 PCT
Gso12g0831 12 8952776 8955287 Gso12g1650 12 40108890 40111145 PCT
Gso6g2488 6 46641863 46644522 Gso12g1650 12 40108890 40111145 PCT