Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1649 ATGAAAATGGGAAGCAACTTCAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCAACTCATGCTCAACTTCAGCTTGGTTTTTATGCCAAGAGTTGCCCAAACGCTGAGCAAATCGTTTTGAAATTTGTCCATGACCATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCACTTCCATGACTGTTTTGTAAGGGGATGTGATGCATCAGTCCTTCTGAACTCAACAACCAATCAAGCTGAAAAGAATGCTCCTCCAAATCTCACAGTAAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAGGCAGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACTTTGTCTGCCAGAGACACTATTGTAGCCACAGGTGGACCATTTTGGAAAGTTCCAACAGGTCGAAGAGATGGGGTCATCTCTAACTTGACGGAAGCCAGAGATAACATTCCTGCTCCATCTTCTAACTTTACCACCCTACAAACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTGGTGCTCACACAATTGGTATCGCTCATTGCTCATCATTGTCAAACCGCTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCGTCATTAGACAGTGAATATGCTGCAAATCTGAAAGCCTTCAAGTGCACGGACCTCAATAAGTTGAACACCACAAAAATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCATGTGATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTGTTGACAAACTCAGTTACAAAGGCTCAAATCATTGAATTGCTTGAAGGGTCAGTTGAAAATTTCTTTGCTGAGTTTGCAACCTCCATGGAGAAAATGGGAAGAATTAATGTAAAGACAGGGACAGAAGGAGAGATCAGGAAGCATTGTGCATTTGTAAATAGCTAA 981 0.4271 MKMGSNFRFLSLCLLALIASTHAQLQLGFYAKSCPNAEQIVLKFVHDHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLSARDTIVATGGPFWKVPTGRRDGVISNLTEARDNIPAPSSNFTTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKAFKCTDLNKLNTTKIEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKAQIIELLEGSVENFFAEFATSMEKMGRINVKTGTEGEIRKHCAFVNS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1649 326 Gene3D - 29 325 - -
Gso12g1649 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Gso12g1649 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gso12g1649 326 PANTHER PEROXIDASE 25-RELATED 12 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Gso12g1649 326 Gene3D Peroxidase, domain 2 160 304 - -
Gso12g1649 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1649 326 PANTHER PEROXIDASE 12 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1649 Gso-Chr12 40100340 40102222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1649 10 326 Peroxidase AT1G05260 69.085 7.70e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1649 K00430 - gmx:547871 652.514