Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1621 ATGCGTGCAGCATGGTGGGCTTTTGGAGAACGAAATTTCAACCGGTTTGGTGGGTGTCTGGGAAAGAACTCAACAATGGGCAAAAACTTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTAAAGAAATGACAGAGCCCCTGCCAACCCTGCCTAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATACTCTATCAGTCAAGAAGATTTTGATACTATAGTAAAGTTATCAAAATTCAGGGTTCCTTGA 321 0.4206 MRAAWWAFGERNFNRFGGCLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLKEMTEPLPTLPKAEAVQQVVELMNTYSISQEDFDTIVKLSKFRVP* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1621 106 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 15 103 - -
Gso12g1621 106 SUPERFAMILY post-AAA+ oligomerization domain-like 9 41 IPR008921 GO:0003677|GO:0006260
Gso12g1621 106 Pfam Replication factor RFC1 C terminal domain 14 103 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Gso12g1621 106 PANTHER REPLICATION FACTOR C SUBUNIT 1 15 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1621 Gso-Chr12 39768094 39769240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1621 9 104 Core DNA Replication Machinery Family AT5G22010 71.134 1.11e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1621 K10754 - gmx:100500251 215.698