Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1614 ATGTCATTGCCACCGCCGTCGCTGGTAACGGCGGCGACTCCGACGGAGCTTCCGATCCGGCAGATTCCGGGAAGCTACGGGTTCCCGTTGCTGGGCCCCATCTCGGATCGGCTTGACTACTTCTGGTTCCAGAAGCCAGAGAGCTTCTTCAGAAAGCGAGTGGAGAAATACAAGAGCACTGTGTTCCGCACCAATGTTCCTCCCTCCTTCCCCTTCTTCGTTAACGTTAATCCCAACGTAATCGCGGTTCTCGACGTGAAATCATTCTCCCACCTCTTCGACATGGACCTCGTCGACAAGAAGGATGTTCTTGTCGGAGACTTTGTCCCCAGCGTCGCCTTCACCGGAAACATGAGAGTCGGCGTTTACCAGGACACTACCGAACCTCAACATTCCAAGGTGAAGAACTACATCATGGATATTCTGAAAAGAAGCTCAGGCATATGGGTATCAGAACTAGAATCAAACCTAGACACACTGTGGGACAACATCGAAGCATCACTCTCGAAATCCTCATCAGTTTCGTACCTTTTCCCGTTACAACAGTTTCTCTTCACGTTCCTCTGCAAAGTCCTTGCCGGTGCAGACCCTGCACGTGACCCTAAAATCGCAGAGTCAGGCTATTCCATGCTTAATAGTTGGCTCGCTCTTCAGCTGCTCCCCACAGTCAGCGTGGGCATCCTTCAACCCCTGGAAGAAATCTTCCTCCACTCCTTTGCCTACCCTTTCTTCCTCGTCGGTGGAAACTACAACAACCTCTACAACTTCATCAAGCAACAAGGCAAGGACACTATAAACCGGGGCGCAATCGGGTTCGGGTTAACCGAAGAAGAAGCCATCCACAATTTGCTCTTCGTGCTGGGCTTCAACTCCTACGGCGGATTCTCCATTTTTCTCCCCTCTCTGATCGATGCCATAGCCAGCAACTCCGCATTGCAGGAGAAGCTTAAAAAAGAAGCGAGAGAAAAGGGCGGGTCAACGCTGACCTTCGACTCGGTCAAAGAGATGGACCTGATCCAATCCGTGGTCTACGAAACGCTGCGCATGAACCCTCCGGTTCCACTCCAGTACGGTCGAGCCCGAAAGGACTTCCGGTTGAGTTCGCACGACTCGGTCTTCCACGTCAAGAAGGGCGAGTTGCTGTGCGGCTTTCAGAAGCTCGTCATGAGGGACTCCGTTATATTCGACGAACCGGACCGGTTCAAGCCGGACCGGTTCACCCAAGAGAAAGGGGCCCAGTTGTTGAACTACTTGTATTGGTCCAATGGGCCTCAGACCGGGTCGCCCAGTGTGTCCAATAAACAGTGCGCGGGTAAGGACGTTGTCACACTCACCGCGGCTTTGATTGTGGCGTACCTTTTTCGCAGGTATGATTCCATCCAAGGGGATGGCAGTTCCATCACTGCCCTTCAAAAGACCAAGTGA 1425 0.5263 MSLPPPSLVTAATPTELPIRQIPGSYGFPLLGPISDRLDYFWFQKPESFFRKRVEKYKSTVFRTNVPPSFPFFVNVNPNVIAVLDVKSFSHLFDMDLVDKKDVLVGDFVPSVAFTGNMRVGVYQDTTEPQHSKVKNYIMDILKRSSGIWVSELESNLDTLWDNIEASLSKSSSVSYLFPLQQFLFTFLCKVLAGADPARDPKIAESGYSMLNSWLALQLLPTVSVGILQPLEEIFLHSFAYPFFLVGGNYNNLYNFIKQQGKDTINRGAIGFGLTEEEAIHNLLFVLGFNSYGGFSIFLPSLIDAIASNSALQEKLKKEAREKGGSTLTFDSVKEMDLIQSVVYETLRMNPPVPLQYGRARKDFRLSSHDSVFHVKKGELLCGFQKLVMRDSVIFDEPDRFKPDRFTQEKGAQLLNYLYWSNGPQTGSPSVSNKQCAGKDVVTLTAALIVAYLFRRYDSIQGDGSSITALQKTK* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1614 474 Gene3D Cytochrome P450 17 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1614 474 PANTHER CYTOCHROME P450 26 10 467 - -
Gso12g1614 474 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1614 474 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1614 474 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1614 474 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 10 467 - -
Gso12g1614 474 Pfam Cytochrome P450 305 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g1614 474 SUPERFAMILY Cytochrome P450 18 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1614 Gso-Chr12 39699238 39704915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1614 95 474 Cytochrome P450 AT4G15440 61.198 1.01e-178 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1614 K10528 - gmx:100784395 905.59