Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1532 ATGGCAGCTAGAGCACATGATGTGGGTGCCCTAGCCATTAGGGGCACCTCAGCAATTCTAAACTTTCCAAACTCAGTTTCCCTTCTTCCAATCGCTAACTCATTATCTTCACGTAAAGATATTCGAGCAGCTGCAGTAGAAGCCGCTGAGAGTCTCAGACCAATCTCCAATTCTCATCACAAGAAAATTAGCCGCAAAAGTAAGTCTACGAGAGCTAAGAAGGTTCCATCATTAGAGGAAACAACAAAGGAAACGGTGTTGGACTCGTCCTTGCACTTGAAGAGCATGCATAGTTTGCTGGATCGTGAAAAATGTGATGTGATCAACAGTACTAGTGGCACAGAGAAAAACAATTTGGATTTGTCTTCAACCATGTTCTTCGATGAGGAGGCGTTGTTTAACACGCCGGGTCTCTTGGATAGAATGGCTGAGAGTTTGGATATTTTCCCACTACTACCATCAATGGATTATTATTGGGATGATCATGCTTACTGCACAGACTTCAATTTATGGACGGATTAA 522 0.4291 MAARAHDVGALAIRGTSAILNFPNSVSLLPIANSLSSRKDIRAAAVEAAESLRPISNSHHKKISRKSKSTRAKKVPSLEETTKETVLDSSLHLKSMHSLLDREKCDVINSTSGTEKNNLDLSSTMFFDEEALFNTPGLLDRMAESLDIFPLLPSMDYYWDDHAYCTDFNLWTD* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1532 173 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 172 - -
Gso12g1532 173 MobiDBLite consensus disorder prediction 56 79 - -
Gso12g1532 173 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 172 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1532 Gso-Chr12 38765903 38766424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1532 1 49 AP2-EREBP Transcription Factor Family AT4G32800 65.306 3.80e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1532 - - gmx:100815039 318.546