Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1511 ATGGCGTTATCTTGGCCGCACGTGCTGCAGTTTCGGTCTCAACCTTTGCTCGGACATGCTAACTGCGTGTTCTTCTCCGATCTCCCCGAATCCCGCTCTCTAGAACTCTCGTGCAGTGATTCCTACACTCTGCTTCGCCGGTGCAAGATCTCCGGTCATTCTCCGGCGACGGTGAAACCGGCGGTGAAATGCCTCAGCAGATCTACGGAGGAGAAGCAATGGAGCGACGCCGAAACCGCCGTATCCGACTCGGACGAAGTTGCTGATGAGCCGAATGACCAGGAACGAACTTCCGCTCCGACAAATGGTCGCTTTGAGTCGCAGAGGATTGCTACCACTTCTTCCGGCGATTCTCTCTCTCTCGGAATTCGAGAACCGGTTTATGAAGTTGTTGAAGTGAGGTCTAATGGGAAAGTATCAACTAGAAAAATCAACAGGAGACAACTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCGTTGCTGGTCCGGGAGTATGCTATACTTCTAAACCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATGGTATAGGAGGGAAAGCGTTTTTAGAGACATTGCTGCCTCGATTGAACCCCAAGATCAACAACGGAGGGCCATCGATGCCCTTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAACAGAGATTGATGGAATTAGAACCTCGTGTACAAGCTCTTCTTGAGGCATTGCCAAATCGGTTGACTGGTGACATATTGGAGCAGCTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGATCCCCATGAAATACGCCGTATATGTATCATGGGAAGAAACTGCACACTTAGTAAAGGAAACAATGACATGGAATGTTCAGTGCCTTTTGAAAAGCAGATTGCTGAGGAGGAGGAGGAGGAAATAGAAATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGTTCACGAAGGCTTGAGGTTAGCAGAGTAGAACTGCTTTTGCAGGTTGGAACATTCTGTGTGGCAATAGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTGGCATTTTGGCTGACAACAGCGGGGATAATTATTGGTGGCATTATTGCTTTCTTTCTAATGTATTCCTACCTCAGGGCTAGGAAAATATTTTGA 1374 0.4614 MALSWPHVLQFRSQPLLGHANCVFFSDLPESRSLELSCSDSYTLLRRCKISGHSPATVKPAVKCLSRSTEEKQWSDAETAVSDSDEVADEPNDQERTSAPTNGRFESQRIATTSSGDSLSLGIREPVYEVVEVRSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNGIGGKAFLETLLPRLNPKINNGGPSMPFELEVVEAALLSRIQRLEQRLMELEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLSKGNNDMECSVPFEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIIGGIIAFFLMYSYLRARKIF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1511 457 Coils Coil 246 266 - -
Gso12g1511 457 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 50 456 IPR039204 -
Gso12g1511 457 Gene3D Magnesium transport protein CorA, transmembrane region 207 388 - -
Gso12g1511 457 Coils Coil 337 357 - -
Gso12g1511 457 MobiDBLite consensus disorder prediction 74 117 - -
Gso12g1511 457 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 50 456 - -
Gso12g1511 457 MobiDBLite consensus disorder prediction 94 117 - -
Gso12g1511 457 CDD Mrs2_Mfm1p-like 130 456 IPR039204 -
Gso12g1511 457 Gene3D - 123 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1511 Gso-Chr12 38494307 38500786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1511 121 457 MRS2 Gene Family AT5G22830 83.680 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1511 K16075 - gmx:100807024 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1511 12 38494307 38500786 Gso11g3332 11 49104309 49110154 GST