Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1481 ATGCTTCCTCCTTTTACTATGTGCAAGACAAAGATGGCAACCAACGCGGCCAGTCCCACTCGCTCCCAACAACAAGCCACCCAAAGCCCAAGAACACCCTCGTCGAGGCCCAGTCCCAGGCCCATCTCTTTCTCCGACAACCCCTCCACCTCCTACAGCAGCAACAGCGCACCCTACAGCGGCTCCACCGGCTATCGCCTCTCCTCCGACACCACCATCTCAAGCTTCTCCTCCCTCACCTCCCTCCGTGACACTCTCCCCGAAAACCCTCACATCTATGACTTCTCCGAAATCTGTGCCGCCACCAACAACTTCCTCGCCAAACGCCACTCCTCCTCCACCCCTTGCTGGCGCTGCACCCTCCGCGGCGCCGATGTCATTGTCTTCCAGCGCAAGTTCCGCCGCAAGCTCCAAACTCCACAGCTCCAGCAACTCCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAGCTCCTCGGCGCCTCCGTCTCCGGCGACCACATCTACCTCGTCTACGACTTCGTCAACAACGGCGCCACCCTCTCCGACTGCCTCCGCAACAAAAACAACGTGCACTTCACCGTCCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCACAGATCTCGCTCACGGCCTCGATTACATTCACAACAAGACCGGTTTGAACATCAATTTCGTCCATAACCATATCAAGAGCAGCAGCATCATCGTCACCGAGCCTTCCTTCAACGCTAGGGTTTGCCACTTCGGCGCCGCGCAGCTCTGCGGCGAAATCGAACTCGATAACCAGAAATTAGGCGAAATTAGTGAAATCGAGGAGAAATTAACATCGTCGCCGGCGAGATCCAAGCAGTTCGAGGGAGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTGGCGACTCAGAAGTCTGATATATACGCTTTTGGAGTGGTGATGTTGGAGCTTTTGTCCGGGGAGGAGCCGTTGAAGTTCAAGTTCGACGAGAAGACGCGCACATTCGTGAGGACGTCGGTGATTGATGCGGCGAGGGCCGCCGTGGTCGACGGCGAAGGTAGCGTGGAGGGGAAGCTGAGGAGGTGGGTGGATCGGAGATTGAAAGATTCTTTTCCTGTTGATGTAGCTGAAAAATGGACACGTGTCGCGCTGGAGTGTGTACACGTGGATCCAGATAAGAGACCGAACATGGGACGCGTCGCTGGCAAGATCTCCAAGTTTTATTTGACGTCGAGGATCTGGTCAGATAGTATTAAGATGCCTGATATGACTGTTTCGTTGGGACCTCGATGA 1305 0.5617 MLPPFTMCKTKMATNAASPTRSQQQATQSPRTPSSRPSPRPISFSDNPSTSYSSNSAPYSGSTGYRLSSDTTISSFSSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFRRKLQTPQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNNGATLSDCLRNKNNVHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNHIKSSSIIVTEPSFNARVCHFGAAQLCGEIELDNQKLGEISEIEEKLTSSPARSKQFEGVRGYMAPEFQASGVATQKSDIYAFGVVMLELLSGEEPLKFKFDEKTRTFVRTSVIDAARAAVVDGEGSVEGKLRRWVDRRLKDSFPVDVAEKWTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDMTVSLGPR* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1481 434 ProSiteProfiles Protein kinase domain profile. 65 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1481 434 Gene3D Phosphorylase Kinase; domain 1 69 176 - -
Gso12g1481 434 PANTHER OS09G0572100 PROTEIN 7 434 - -
Gso12g1481 434 SUPERFAMILY Protein kinase-like (PK-like) 89 404 IPR011009 -
Gso12g1481 434 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1481 434 MobiDBLite consensus disorder prediction 1 59 - -
Gso12g1481 434 MobiDBLite consensus disorder prediction 11 59 - -
Gso12g1481 434 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 434 - -
Gso12g1481 434 Gene3D Transferase(Phosphotransferase) domain 1 179 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1481 Gso-Chr12 37899594 37901523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1481 88 422 Receptor kinase-like Gene Family AT1G51940 31.858 9.65e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso12g1481 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1481 - - gmx:100792694 811.986