Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1453 ATGCGATTGCTATGGGGGCTAAGGCTGCCCCTACTCATACTGATTCAACTTTTATACCCCAACAAATCAACCTACAAATTATACGCTGAGGCTTTGTTCACTTTCAAGGGTTCTATTGGAGGTCCACAACAATTAGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGGAATAACAGCAAAGATAGATGGGAATAACGACGTTCCAACACTTACACCTCTTCAAGAAACTCAAGTTAGAAAACCAGGAGGAACAAGGGCTGCTGCCATAGTTGGTATTCTTGTTGCTGCCTTAGTCGTCATTGTCATTTTGGTGACTGTCTGTATCTGCTTGATGCGTGTTAAAAGATTTATGAGGCAAACATCTGAGGCTGCTTCTTCTATGCCATCTCCCACTGTTGAGATGGGAAGAGTCAACAACACTCAGAATGTTAATGCTTTCCCTCCACATTATACGCTGAACACAAGACAGTTAACAATTTTGGAACTAGAACAAGCTACACGAAATTTCAGTCATAGTAATATTATTAGTGAAGGTGGATTTGGTTTTGTATACAAGGGCTTGCTTCAAGATGGATCCATTGTGGCTATAAAAAGGCGTCTATTTGCTCTGACACAGGATTTCGTCCTTGAGGTGAATCAGATAGCTCATATTCACCACACCCATCTTGTGAAGCTCATAGGCTATTACGAAGATAGCTATCAACAATTACTTGTATATGAATATCTCCCTAACGGCAATGTAGGGAGTCACTTATATGACAGTGAAGGTTTACCTATTGGAAGGTTAGACTTGTGGCGAAGGATATCTATTGCTTTAGGCGCGTCCAAAGGTGTGGAACATCTTCATAGTTTGGTCCCTCCTTTGGTTCACACAAATTTTAGAACTAGCAATGTTCTGTTAGATGAAAATTACACGGCCAAGGTTGCTGATTATGGATTCTGCAAATTGCAAACACAAGTTGATAATGCTGGCTCATCTTCACATGTAGACTGCTTTCTAGACCCAGAGTTGAGCTTTCCACAAAACTATTCGGAGAAGAGTGATGTACACAGTTTCGGGGTCTTCTTACTAGAGTTGATTAGTGGTTGTGAAGCACACCGCAAAAGCTTGTCAAACCCAGATGAAAACATAGTGTTTAAGGCAAAAAATAGCGTTGACTTGGACAACTTTGTTGACATAACGCTGGGAGAGCAAGAAAAGCATGGTGCTAGACGAATGATGAAATTGGCATTGCTATGTGTGGATGTGACTAGTAGAAGACCATCAATGGCGCAAATTGTGCAAGAGTTGGAGCAGATTCAAAGAGAAATTGCTCCAGTGTATTCTCAATTCAACGAGGAGATTGGTGCCGTGACTCTAGGGAGTGAGCTCTTTCAGTAA 1425 0.4126 MRLLWGLRLPLLILIQLLYPNKSTYKLYAEALFTFKGSIGGPQQLGCSIVKYPCQMQWPCLDCYKLKDPGGITAKIDGNNDVPTLTPLQETQVRKPGGTRAAAIVGILVAALVVIVILVTVCICLMRVKRFMRQTSEAASSMPSPTVEMGRVNNTQNVNAFPPHYTLNTRQLTILELEQATRNFSHSNIISEGGFGFVYKGLLQDGSIVAIKRRLFALTQDFVLEVNQIAHIHHTHLVKLIGYYEDSYQQLLVYEYLPNGNVGSHLYDSEGLPIGRLDLWRRISIALGASKGVEHLHSLVPPLVHTNFRTSNVLLDENYTAKVADYGFCKLQTQVDNAGSSSHVDCFLDPELSFPQNYSEKSDVHSFGVFLLELISGCEAHRKSLSNPDENIVFKAKNSVDLDNFVDITLGEQEKHGARRMMKLALLCVDVTSRRPSMAQIVQELEQIQREIAPVYSQFNEEIGAVTLGSELFQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1453 474 Gene3D Phosphorylase Kinase; domain 1 146 256 - -
Gso12g1453 474 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 72 472 - -
Gso12g1453 474 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 72 472 - -
Gso12g1453 474 SUPERFAMILY Protein kinase-like (PK-like) 163 454 IPR011009 -
Gso12g1453 474 ProSiteProfiles Protein kinase domain profile. 184 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1453 474 Gene3D Transferase(Phosphotransferase) domain 1 257 464 - -
Gso12g1453 474 Pfam Protein tyrosine and serine/threonine kinase 188 445 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1453 Gso-Chr12 37374645 37379340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1453 91 452 Receptor kinase-like Gene Family AT4G02010 34.555 1.39e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Gso12g1453 PK_Tyr_Ser-Thr 8.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1453 - - gmx:100780443 896.73