Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1441 ATGGAGGGAGATCAACATGGCTCTAATTACTCTTTTCCACCTGGCTTTAGATTCCACCCTTCCGATGAAGAACTCATAGTTCATTACTTGGAAAACAAAGTCAGTTCACGTCCACTTCCAGCTTGCATTATTGCTGAAATTGATCTCTATAAGTATAACCCGTGGGAGCTACCGAATAAGTCCTTGTTTGGAGAGGAAGAATGGTATTTCTTTAGCCCGAGAGACAGGAAGTACCCGAATGGATTGAGGCCAAACAGGGCTGCAGCCTCAGGATACTGGAAGGCAACTGGAACTGACAAGCCAATTCTTTCTTCTTGCGGATCGAGGCGCATAGGTGTGAAGAAAGCTCTGGTGTTTTATTCAGGTCGACCTCCTAAGGGTGCTAAGACAGATTGGATCATGAATGAGTATAGGTTGGTTGACACAACCATCAAATCCTCAAGGCTAAAAGGCTCCATGAGATTGGATGACTGGGTACTATGCCGGGTTCGATATAAAGGCTACTCTCAGAAGAATTCATGTGAAAATCAAGAGAGTCCTAGTGAACTAAACTTGTCAGCAAAACTACTGAGGAGTGAAGAAAACCCAACAAAAATGAACTGTCGGGCTGACATGATCCCTGATTATCAATATAAAGACTATCAAATCATAGCCTCTATTCTTGTTGGTGGACCTATTCCTCCCATTGAAAGCATGCCAAATCTGAGCTTTAAGGGTTGCAAAGGCAACAATGTAGTTTCAGATTATGAAGATGGTTTCACTAAAGGGAATTCTCAAACGACAATTCCTTCATTGGAAAGTTACTTCAACCCACTGACAAGAAAATCCAATGAAGATGAACAGTATGGAAATCTCATTTCTTTCAACAGGAAGTTCAACACTGATAACAGAATGGACGGATCTACTAGCAAAGTGTTGAACAGTAGAGAATTGAATTGCTACAACCAAAACCATTCTCAAGATGACATTTTCAATGGGAACCCACCAGATCCTACCATCAATTTTCAAGAGCTAAACGAATTAGACTTTTCAGGAAGGTACCATCAGTGA 1050 0.4143 MEGDQHGSNYSFPPGFRFHPSDEELIVHYLENKVSSRPLPACIIAEIDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSCGSRRIGVKKALVFYSGRPPKGAKTDWIMNEYRLVDTTIKSSRLKGSMRLDDWVLCRVRYKGYSQKNSCENQESPSELNLSAKLLRSEENPTKMNCRADMIPDYQYKDYQIIASILVGGPIPPIESMPNLSFKGCKGNNVVSDYEDGFTKGNSQTTIPSLESYFNPLTRKSNEDEQYGNLISFNRKFNTDNRMDGSTSKVLNSRELNCYNQNHSQDDIFNGNPPDPTINFQELNELDFSGRYHQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1441 349 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 319 - -
Gso12g1441 349 Gene3D NAC domain 21 170 IPR036093 GO:0003677|GO:0006355
Gso12g1441 349 PANTHER NAC TRANSCRIPTION FACTOR 56 1 319 - -
Gso12g1441 349 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Gso12g1441 349 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Gso12g1441 349 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1441 Gso-Chr12 37149717 37152129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1441 12 175 NAC Transcription Factor Family AT1G61110 66.860 5.29e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso12g1441 NAM 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1441 - - gmx:100777776 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1441 12 37149717 37152129 Gso11g3393 11 49814890 49817111 GST