Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1413 ATGGAAGAGATGGAGTTTGATTATGAAGAGGTTGTAAAAGCAACGGAAAACTTCAACCCTAGAAGAATCATAGGCAAAGGAAGCCATGGCATGGTCTACAAAGGCGTTCTTTTCAACGACAGATTGCAGGTTGCTGTGAAGAAGCCATCTCAAGGCCTTGAATCACTCCACGACAACTCCAAGCTCGAAAACGAAATCCGAGTTCTATCTTCTCTACGCGAAATCCCTCACGTGGTTAATCTTCTGGGGACAAGTAGCTATAATGATCACAAGAAGCTCATCGTGATGGAACTCATGCCCAATGGTTCCCTCCATGACTTGCTCCATGGCCATGGCCATGCCAATAAAACCACGTGGTCTATACTCTTTGCATGTGTAATGCAATGTTGA 390 0.4487 MEEMEFDYEEVVKATENFNPRRIIGKGSHGMVYKGVLFNDRLQVAVKKPSQGLESLHDNSKLENEIRVLSSLREIPHVVNLLGTSSYNDHKKLIVMELMPNGSLHDLLHGHGHANKTTWSILFACVMQC* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1413 129 PANTHER - 5 119 - -
Gso12g1413 129 ProSiteProfiles Protein kinase domain profile. 18 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1413 129 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Gso12g1413 129 SUPERFAMILY Protein kinase-like (PK-like) 6 126 IPR011009 -
Gso12g1413 129 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Gso12g1413 129 PANTHER OS01G0750732 PROTEIN 5 119 - -
Gso12g1413 129 Pfam Protein tyrosine and serine/threonine kinase 22 122 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1413 Gso-Chr12 36658671 36659060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1413 4 110 Receptor kinase-like Gene Family AT2G48010 38.596 3.07e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso12g1413 PK_Tyr_Ser-Thr 8.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1413 - - gsj:114378966 256.914