Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1396 ATGGGGGATGAGTCGCCCAGAAATAAAGTGAAGTTCCTCTGCAGCTACGGCGGGAAGGTCCTTCCACGACCCTCCGATGGCCTCCTCAGGTATGTCGGCGGCGAGACTCGTGTGGTTTCTGTGCCTCGTGACATCACATTTCCCGAGCTAATGAAGAAGGTGAGTAGCATGGTGGAGGGAGGCGGAGAGATGGTCCTAAAATACCAACTGGTTCCGGAAGATCTGGACGCATTGGTGTCGGTGAGAACAGAGGAAGACGTGAAGCACATGATGGAGGAGCACGATCGGCACCACACTGGAGGCTTGCTCCGTGCGTTCTTGTTCCCCCCTTGCAAGCACATAGGTCTGATGGCGTGCGAAACGTATCTGTTGGAGCAGCGTTACATAGACGCCATTAATGGGATCATCCGAACAAGTTCCAGGAAGGGCTCTGCCTGTTCTTCCCCAAAATCAAACTCCCCCGATGCCACGGATCAGCACTCTCCTCGCTTTTCGATTTCCAGAGTGCAAAGCTCTCCGAACCTCAGTGGCCTCGATCATCATCATCAACATCATCATCATCATCAAAACCCTAATTTTCATTTGTCCAAACCGCCGCAAGATCCTCAAATGGGAATGAGGCTTGGTGGAGGAAGGGCTCCCACTCCCGCTTTTAACCATCATTACTCCAGGCAACCACCCTACAGAGCTTATGCCTACTATGATGACTCTGCAGCAGCCTCCTATGCCCATGATAATAGAATTCATACTGTGTCCAGGAGTCCTAGAACAAAATCTATTTGGGAATGA 789 0.5146 MGDESPRNKVKFLCSYGGKVLPRPSDGLLRYVGGETRVVSVPRDITFPELMKKVSSMVEGGGEMVLKYQLVPEDLDALVSVRTEEDVKHMMEEHDRHHTGGLLRAFLFPPCKHIGLMACETYLLEQRYIDAINGIIRTSSRKGSACSSPKSNSPDATDQHSPRFSISRVQSSPNLSGLDHHHQHHHHHQNPNFHLSKPPQDPQMGMRLGGGRAPTPAFNHHYSRQPPYRAYAYYDDSAAASYAHDNRIHTVSRSPRTKSIWE* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1396 262 PANTHER OS05G0427100 PROTEIN-RELATED 4 217 - -
Gso12g1396 262 Gene3D - 30 109 - -
Gso12g1396 262 SUPERFAMILY CAD & PB1 domains 25 111 - -
Gso12g1396 262 MobiDBLite consensus disorder prediction 140 177 - -
Gso12g1396 262 MobiDBLite consensus disorder prediction 140 219 - -
Gso12g1396 262 CDD PB1_UP2 13 108 - -
Gso12g1396 262 Pfam PB1 domain 29 109 IPR000270 GO:0005515
Gso12g1396 262 SMART PB1_new 24 110 IPR000270 GO:0005515
Gso12g1396 262 PANTHER OS05G0427100 PROTEIN 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1396 Gso-Chr12 36411651 36413049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1396 3 152 MAP Kinase Kinase Kinase AT3G46920 42.857 1.89e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1396 - - gmx:100799918 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1396 12 36411651 36413049 Gso12g1396 12 36411651 36413049 ECH