Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1326 ATGGAGCTGGTTCTGCAATACTTGAAGCGCAAGGTCTTCTCCTGCCCTTTGCCAGCCTCTATCATTCCTGAGCTTCATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGATACTTCTTTAGCACCAAAGTGGCCAAATATCCCAACGGAAATCGCTCCAACAGAGCCACAAATTCGGGTTATTGGAAGGCAACTGGTTTGGACAAACAAATTGTTACTTCAAAAGGGAACAACCAAGTTTTCGAAATGAATAAGACACTTGTTTTCTGCAGAGGCAAGCCTCCTTATGGATCCAGAACTGATTGGATCATGCACGAGTATCGCCTCATCCTTAACGGCTCTCAGTCTAAGGTGAGGCCAAACAAACTTCTACTATTTATGTAA 402 0.4428 MELVLQYLKRKVFSCPLPASIIPELHVCKSDPWDLPGDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNNQVFEMNKTLVFCRGKPPYGSRTDWIMHEYRLILNGSQSKVRPNKLLLFM* 134
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1326 133 ProSiteProfiles NAC domain profile. 1 133 IPR003441 GO:0003677|GO:0006355
Gso12g1326 133 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 2 126 - -
Gso12g1326 133 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 126 - -
Gso12g1326 133 Pfam No apical meristem (NAM) protein 2 115 IPR003441 GO:0003677|GO:0006355
Gso12g1326 133 Gene3D NAC domain 1 130 IPR036093 GO:0003677|GO:0006355
Gso12g1326 133 SUPERFAMILY NAC domain 2 122 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso12g1326 Gso-Chr12 31481717 31482195 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1326 2 115 NAC Transcription Factor Family AT5G13180 78.070 6.87e-64 193
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso12g1326 NAM 6.2e-23 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1326 - - gmx:100793870 281.182