Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso12g1326 | ATGGAGCTGGTTCTGCAATACTTGAAGCGCAAGGTCTTCTCCTGCCCTTTGCCAGCCTCTATCATTCCTGAGCTTCATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGATACTTCTTTAGCACCAAAGTGGCCAAATATCCCAACGGAAATCGCTCCAACAGAGCCACAAATTCGGGTTATTGGAAGGCAACTGGTTTGGACAAACAAATTGTTACTTCAAAAGGGAACAACCAAGTTTTCGAAATGAATAAGACACTTGTTTTCTGCAGAGGCAAGCCTCCTTATGGATCCAGAACTGATTGGATCATGCACGAGTATCGCCTCATCCTTAACGGCTCTCAGTCTAAGGTGAGGCCAAACAAACTTCTACTATTTATGTAA | 402 | 0.4428 | MELVLQYLKRKVFSCPLPASIIPELHVCKSDPWDLPGDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNNQVFEMNKTLVFCRGKPPYGSRTDWIMHEYRLILNGSQSKVRPNKLLLFM* | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso12g1326 | 133 | ProSiteProfiles | NAC domain profile. | 1 | 133 | IPR003441 | GO:0003677|GO:0006355 | |
Gso12g1326 | 133 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 83-LIKE | 2 | 126 | - | - | |
Gso12g1326 | 133 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 2 | 126 | - | - | |
Gso12g1326 | 133 | Pfam | No apical meristem (NAM) protein | 2 | 115 | IPR003441 | GO:0003677|GO:0006355 | |
Gso12g1326 | 133 | Gene3D | NAC domain | 1 | 130 | IPR036093 | GO:0003677|GO:0006355 | |
Gso12g1326 | 133 | SUPERFAMILY | NAC domain | 2 | 122 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso12g1326 | Gso-Chr12 | 31481717 | 31482195 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso12g1326 | 2 | 115 | NAC Transcription Factor Family | AT5G13180 | 78.070 | 6.87e-64 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Gso12g1326 | NAM | 6.2e-23 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso12g1326 | - | - | gmx:100793870 | 281.182 |