Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1248 ATGGAGAAGGTGAATGATACCATGGCAACGTTAGCTAGAGCAGAATACTGGGACAATGATGTTGTGGTTGCTGTCATTTTGGGTACTGGAAGCAATGCTTGCTATGTTGAGCATATCAATGCCATTCCTAAGTTGCAGGGCTACGTCTCTTCTTCTAGGAAAATGATCATCTTAATATGCGAAAAGCATTCCTTGATTCAGATCATTAGCATTGAGTGGGGTGCTTTCTCAAATGGTCTCCCTTTAACCAAGTTCGATAGGGAAATGGATGCTACTAGCATCAATCCGGGTGAGCAGGCCCAACCAAAAAGGATTCTTGAGGTGAAGAATATTCTTGGTTTGACCAAACAACATGTTGCTAGTCATTTGCAGTGGCACACTTGGTTGCTCCAGTCACTGCAAAAGATTTGCTGA 414 0.43 MEKVNDTMATLARAEYWDNDVVVAVILGTGSNACYVEHINAIPKLQGYVSSSRKMIILICEKHSLIQIISIEWGAFSNGLPLTKFDREMDATSINPGEQAQPKRILEVKNILGLTKQHVASHLQWHTWLLQSLQKIC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1248 137 PANTHER HEXOKINASE 4 107 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso12g1248 137 ProSiteProfiles Hexokinase domain profile. 1 137 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso12g1248 137 Pfam Hexokinase 23 104 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gso12g1248 137 Gene3D - 1 105 - -
Gso12g1248 137 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 4 107 - -
Gso12g1248 137 SUPERFAMILY Actin-like ATPase domain 20 105 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1248 Gso-Chr12 22860490 22865045 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso12g1248 Hexokinase_2 5.9e-19 CL0108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1248 K00844 - gsj:114378512 274.248