Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1228 ATGAAGTATATACTCCCTAAAAGTGTGTATATAGATAGGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTGCCTGATATGAAGATCACCTTGAAATTTGAGGTTGTGAAAGATTGCTTTGGCGAATCTGCTGACCTGGCTCTTCGACGATATTTTAAATCTAAGCTGATTGATTTCTTTGATATGCATCCTGAGCTCCAGGACATGCCTACCCAAAAGTCAACATCATCTTATAAGCCAGCAAAAAGAGTGCTTGACTTTTCCCTCATGGAGGACAATGATGGCTTGGGCATTGAAATGGACAAGTTAGAATCTATCAGAGCTCTGCATGAATCTAGCAGAGGATGTTCTGAGGATTGCAACTCTTTTGGTTCTGTTTCTGCACCTCAGGAGGCAAGAAATAATGCTCGGATATTGATCTCTGGCTCATTCAGCAACCGGTATGAAAGGATCACACGGTGTGCAAAAGGCTGGGAGTCCAACCAAGTGCCCAAGAGGAAGTCATTGAAGTCAAGACATTGTATCAAGTCAAATCAAGTGAAATAG 549 0.4171 MKYILPKSVYIDRVLVHDKKSLCMVPDMKITLKFEVVKDCFGESADLALRRYFKSKLIDFFDMHPELQDMPTQKSTSSYKPAKRVLDFSLMEDNDGLGIEMDKLESIRALHESSRGCSEDCNSFGSVSAPQEARNNARILISGSFSNRYERITRCAKGWESNQVPKRKSLKSRHCIKSNQVK* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1228 182 PANTHER DNA REPLICATION FACTOR CDT1 1 72 IPR045173 GO:0003677|GO:0030174|GO:0071163
Gso12g1228 182 PANTHER DNA REPLICATION FACTOR CDT1 67 137 IPR045173 GO:0003677|GO:0030174|GO:0071163
Gso12g1228 182 PANTHER EXPRESSED PROTEIN 67 137 - -
Gso12g1228 182 PANTHER EXPRESSED PROTEIN 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1228 Gso-Chr12 21732665 21744153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1228 1 66 Core DNA Replication Machinery Family AT2G31270 40.580 5.81e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1228 K10727 - gsj:114379642 369.007