Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1227 ATGACTGATAATACATCTCTTTCTGATATAATTAATCCAGCTATCTTTTTTCTGTTTGTTTTCGCTGAATCTTCTTTAAGAATTAAACGGATTAATCATTTGTTAATTTGTACGTGTGTGTGTACGAGAAAACTAGCAGCAACGCCTCGCCAGATGCTAACGCTGAGGGAGAAGTACTATGATTTCGACCAGATTTCCAGTAAGGTTTTCAAGTGCAGGCGTGATGATCAGTTTTTCACCATGAAAATTGTCTCCATTCTGAACGAAGAAAACCAAGCGAACAACGGGGTTCCGTACTGGATTATAAGAGAAATCTCTATTCTCAAAGAGCTGGACCACATCAACATTGTGAGGTTGATCGATGTGATGACCGATGGGCCCGACCTGTTTCTTGTTTTTGAGTATCTTGACAATGAATTCCAAGCTGATTTCCTGAAAAATCCAAAGATGTTTATGTACCCACAAATGAAAAAAGAGTTTCTTTATCAAATTCTCAATACAGTTGCGTATCTGCATGCTCGTAAAATTCTTCTCAGAGATTTGAGACCTGAGAATATTCTGGTTAATGTCAGAACCCAAGTTCTGAAGATTGCACTCTTTGGGGCAGCCAGAACATTTGAAGCTCCTCTTGAGGCTTACTCTAGCAGTGTGGGTTGTCTTTCTTATAGGTCACCTGAAGTCTTGTTTCAGTTTGGCTGCGAGAAATACTCAACTCCAAATGATGTCTGGGCCGTGGGTTGTATATTTGGCGAGATGCTTCTTCACCGGCCTCTATTCTCTGGTCCAAGTGATGTGGAGCTGCTGGATGAGATATTTACCTTGCTTGGTACCCCAACAGAAGAAACCTGGCCTGGAGTGACTTCTATATGCGGAACCTGTGCTTTAATGGGACCTCCACAACAGCCCAAGGACCTGGCAAAAGAGTTTCCAATGCTCAATCCAGATGGTCTTGATCTACTCTCCAAAATGCTTTGCCTTTGTCCAAATTATAGAATTTCAGCTGAAGATGCTGTTAAGCACCCATATTTCAAAGGAGTATGA 1041 0.414 MTDNTSLSDIINPAIFFLFVFAESSLRIKRINHLLICTCVCTRKLAATPRQMLTLREKYYDFDQISSKVFKCRRDDQFFTMKIVSILNEENQANNGVPYWIIREISILKELDHINIVRLIDVMTDGPDLFLVFEYLDNEFQADFLKNPKMFMYPQMKKEFLYQILNTVAYLHARKILLRDLRPENILVNVRTQVLKIALFGAARTFEAPLEAYSSSVGCLSYRSPEVLFQFGCEKYSTPNDVWAVGCIFGEMLLHRPLFSGPSDVELLDEIFTLLGTPTEETWPGVTSICGTCALMGPPQQPKDLAKEFPMLNPDGLDLLSKMLCLCPNYRISAEDAVKHPYFKGV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1227 346 ProSiteProfiles Protein kinase domain profile. 55 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1227 346 Pfam Protein kinase domain 67 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1227 346 SUPERFAMILY Protein kinase-like (PK-like) 67 345 IPR011009 -
Gso12g1227 346 PANTHER CYCLIN-DEPENDENT KINASE A-2 76 344 - -
Gso12g1227 346 Gene3D Transferase(Phosphotransferase) domain 1 142 346 - -
Gso12g1227 346 Gene3D Phosphorylase Kinase; domain 1 67 137 - -
Gso12g1227 346 PANTHER CELL DIVISION PROTEIN KINASE 76 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1227 Gso-Chr12 21728028 21731166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1227 69 344 Core Cell Cycle Gene Families AT3G48750 45.652 6.68e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gso12g1227 Pkinase 5.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1227 K02206 - gmx:100804719 706.442